RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MRPS30Q9NP92 439 aaKnown RBP15.82■□□□□ 0.12
CCDC43-202ENST00000457422 LMCD1Q9NZU5 365 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 A0A0J9YVX5 310 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 ANKRD33BA6NCL7 494 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 AXIN1O15169 862 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 CLPXO76031 633 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 CCNB2O95067 398 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 MFN2O95140 757 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 GADD45GO95257 159 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 GRK3P35626 688 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 AHRP35869 848 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 HYAL2Q12891 473 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 PUM1Q14671 1186 aaKnown RBP eCLIP15.82■□□□□ 0.12
CCDC43-202ENST00000457422 MAPK11Q15759 364 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 DEPDC4Q8N2C3 294 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 OR9Q2Q8NGE9 314 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 FAM81AQ8TBF8 368 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 C17orf62Q9BQA9 187 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 ZNF556Q9HAH1 456 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 PREBQ9HCU5 417 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 PRDM8Q9NQV8 689 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 SNRNP200O75643 2136 aaKnown RBP15.81■□□□□ 0.12
CCDC43-202ENST00000457422 SH3PXD2BA1X283 911 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 PCDH17O14917 1159 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 SLC22A1O15245 554 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 VIPP01282 170 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 HOXB3P14651 431 aaPredicted RBP15.81■□□□□ 0.12
CCDC43-202ENST00000457422 COL9A1P20849 921 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 FUT4P22083 530 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 CCT3P49368 545 aaKnown RBP15.81■□□□□ 0.12
CCDC43-202ENST00000457422 NDUFAF5Q5TEU4 345 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 KLHL35Q6PF15 583 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 SLC44A2Q8IWA5 706 aaPredicted RBP15.81■□□□□ 0.12
CCDC43-202ENST00000457422 PHF10Q8WUB8 498 aaKnown RBP15.81■□□□□ 0.12
CCDC43-202ENST00000457422 RASSF5Q8WWW0 418 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 ASB12Q8WXK4 309 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 FAIM2Q9BWQ8 316 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 MCOLN1Q9GZU1 580 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 KLHL31Q9H511 634 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 NECTIN3Q9NQS3 549 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 FKBP14Q9NWM8 211 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 ETAA1Q9NY74 926 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 PNMA8BQ9ULN7 279 aaPredicted RBP15.81■□□□□ 0.12
CCDC43-202ENST00000457422 UNC80Q8N2C7 3258 aa15.81■□□□□ 0.12
CCDC43-202ENST00000457422 SLC31A1O15431 190 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 SH3BP5O60239 455 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 FADS2O95864 444 aaKnown RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 GABRB1P18505 474 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 NR4A1P22736 598 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 MAGEA8P43361 318 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 ST13P50502 369 aaKnown RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 PPP2CBP62714 309 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 PPP2CAP67775 309 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 GANABQ14697 944 aaKnown RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 RPE65Q16518 533 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 UBE2UQ5VVX9 321 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 AHSA2Q719I0 299 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 DENND6BQ8NEG7 585 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 OR2L3Q8NG85 312 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 GPR32P1Q8NGA4 272 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 FNDC8Q8TC99 324 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 RAB8BQ92930 207 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 MS4A6EQ96DS6 147 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 MACROD1Q9BQ69 325 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 GLIPR2Q9H4G4 154 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 SERHL2Q9H4I8 314 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 KIR3DX1Q9H7L2 352 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 FGF22Q9HCT0 170 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 SCHIP1Q9P0W5 487 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 PSORS1C1Q9UIG5 152 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 HEBP2Q9Y5Z4 205 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3DA0A087WVF3 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3IA0A087WXS9 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3EA0A087X179 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3KA0A087X1G2 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 OR2A25A4D2G3 310 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3FA6NER0 549 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3LB9A6J9 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 C4orf51C9J302 202 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 MAN2B1O00754 1011 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 FFAR1O14842 300 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 HAT1O14929 419 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 KDM1AO60341 852 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 ADAM23O75077 832 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 HOXC4P09017 264 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3HP0C7X1 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 PEBP1P30086 187 aaKnown RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 LIM2P55344 173 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 SLC9A5Q14940 896 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 COLEC12Q5KU26 742 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3GQ6DHY5 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 MRM1Q6IN84 353 aaKnown RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3CQ6IPX1 549 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 ZNF770Q6IQ21 691 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 CCDC81Q6ZN84 652 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 P2RY8Q86VZ1 359 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 CCDC103Q8IW40 242 aa15.8■□□□□ 0.12
CCDC43-202ENST00000457422 TBC1D3Q8IZP1 549 aaPredicted RBP15.8■□□□□ 0.12
CCDC43-202ENST00000457422 DNAJC22Q8N4W6 341 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms