RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SPIN4Q56A73 249 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 SFT2D3Q587I9 215 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 SPDYAQ5MJ70 313 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 ACSM2BQ68CK6 577 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF781Q8N8C0 355 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 DNAJB14Q8TBM8 379 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 RAB3IL1Q8TBN0 382 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 AGR3Q8TD06 166 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TWIST2Q8WVJ9 160 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF75CPQ92670 426 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TANKQ92844 425 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 C3orf30Q96M34 536 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TUBB6Q9BUF5 446 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 ALOXE3Q9BYJ1 711 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 THAP1Q9NVV9 213 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 TEX10Q9NXF1 929 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 VTI1BQ9UEU0 232 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 C19orf25Q9UFG5 118 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-206ENST00000457035 CES1P1Q9UKY3 287 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 EML6Q6ZMW3 1958 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
ATG4A-206ENST00000457035 HELZ2Q9BYK8 2649 aaKnown RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 CPAMD8Q8IZJ3 1885 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PRRC2CQ9Y520 2896 aaKnown RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 NSG1A0A0A6YYJ2 146 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 MYOCOSA0A1B0GUC4 107 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ARHGAP10A1A4S6 786 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 GLOD5A6NK44 160 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 KLF11O14901 512 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PIP5K1BO14986 540 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 LSM1O15116 133 aaKnown RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 RGS14O43566 566 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 FGF17O60258 216 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 SEC22BO75396 215 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 GPR75O95800 540 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 AIFM1O95831 613 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 CHEK2O96017 543 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ICAM2P13598 275 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 TIA1P31483 386 aaKnown RBP eCLIP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 BUD31P41223 144 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 MAPK12P53778 367 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PRR20EP86478 221 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PRR20CP86479 221 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PRR20DP86480 221 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PRR20BP86481 221 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PRR20AP86496 221 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 OCRLQ01968 901 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ACTN3Q08043 901 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 BIKQ13323 160 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 IMPG1Q17R60 797 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 RFTN2Q52LD8 501 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 XKR7Q5GH72 579 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 NDUFAF5Q5TEU4 345 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ATG16L1Q676U5 607 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 CLNKQ7Z7G1 428 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 TRIM42Q8IWZ5 723 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 OR4N5Q8IXE1 308 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 DDIASQ8IXT1 998 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 GALNT16Q8N428 558 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 CLEC1AQ8NC01 280 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 NFAM1Q8NET5 270 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-206ENST00000457035 FDCSPQ8NFU4 85 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 FAM76AQ8TAV0 307 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 C16orf78Q8WTQ4 265 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PSMF1Q92530 271 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ABHD17AQ96GS6 310 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 FCRL1Q96LA6 429 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 CCT7Q99832 543 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ADNPQ9H2P0 1102 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ACBD3Q9H3P7 528 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 LRTM1Q9HBL6 345 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 ZNF160Q9HCG1 818 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PNPOQ9NVS9 261 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 C1orf109Q9NX04 203 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 PCDHA9Q9Y5H5 950 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 SVILO95425 2214 aa9.41□□□□□ -0.9
ATG4A-206ENST00000457035 NINQ8N4C6 2090 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 A6NL46 340 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 A8MUA0 341 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PCDH7O60245 1069 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 GUCY1B2O75343 617 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 SEC24DO94855 1032 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 JUNP05412 331 aaKnown RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 SERPINA7P05543 415 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 CELA2AP08217 269 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 ANXA4P09525 319 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PRR35P0CG20 571 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 NR2F6P10588 404 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PPP2R1BP30154 601 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 GPR143P51810 404 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 TAS2R50P59544 299 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 ID2Q02363 134 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 FOLH1Q04609 750 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 STX4Q12846 297 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 SERTAD2Q14140 314 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 PLAG1Q6DJT9 500 aa9.4□□□□□ -0.9
ATG4A-206ENST00000457035 NOXRED1Q6NXP6 359 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms