RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 MS4A4EQ96PG1 132 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 OR52E6Q96RD3 313 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC29A3Q9BZD2 475 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 CLMPQ9H6B4 373 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 MVB12BQ9H7P6 319 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 RPF1Q9H9Y2 349 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 KIF17Q9P2E2 1029 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 ERVK-19Q9WJR5 959 aa4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 MTCL1Q9Y4B5 1905 aaKnown RBP4.33□□□□□ -1.72
DEPDC1-202ENST00000456315 COL4A4P53420 1690 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 H0Y626 953 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GABRDO14764 452 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 MTRF1O75570 445 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TRIM16O95361 564 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 IGF2P01344 180 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ATF6P18850 670 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PTNP21246 168 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RPS5P46782 204 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF81P51508 661 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 OR10A3P58181 314 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 VMACQ2NL98 169 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TCTN3Q6NUS6 607 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ALKAL1Q6UXT8 129 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 C16orf62Q7Z3J2 963 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RNF130Q86XS8 419 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 P3H2Q8IVL5 708 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ADGRF3Q8IZF5 1079 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 FBXO39Q8N4B4 442 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ARIH2OSQ8N7S6 290 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR32P1Q8NGA4 272 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 BLOC1S5Q8TDH9 187 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC25A46Q96AG3 418 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PEX11GQ96HA9 241 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TSGA13Q96PP4 275 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PLA2G12AQ9BZM1 189 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 NT5MQ9NPB1 228 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 IL20RAQ9UHF4 553 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PLXNB3Q9ULL4 1909 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ZSWIM8A7E2V4 1837 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 DRGXA6NNA5 263 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 KCNAB3O43448 404 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 KERAO60938 352 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDH8O95206 1070 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GUCA1CO95843 209 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 KRT6AP02538 564 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ENGP17813 658 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 FPR1P21462 350 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ITPKAP23677 461 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 HNF4AP41235 474 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TPI1P60174 286 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PPIGQ13427 754 aaKnown RBP eCLIP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 IER5LQ5T953 404 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TYW3Q6IPR3 259 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 Q8N402 240 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 OR11G2Q8NGC1 345 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 OR4K1Q8NGD4 311 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GAS2L1Q99501 681 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 C12orf57Q99622 126 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 BPIFA1Q9NP55 256 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 FZD3Q9NPG1 666 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 C8orf4Q9NR00 106 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 CTPS2Q9NRF8 586 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RDH8Q9NYR8 311 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ZIM2Q9NZV7 527 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RCOR3Q9P2K3 495 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TEKT2Q9UIF3 430 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 KCNE2Q9Y6J6 123 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GNGT2O14610 69 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TO15178 435 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 CD3GP09693 182 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RHCEP18577 417 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 MRPL19P49406 292 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GBX2P52951 348 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RPL6Q02878 288 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 CXCL9Q07325 125 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF385BQ569K4 471 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 C9orf57Q5W0N0 161 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 CHMP1BQ7LBR1 199 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PRSS45Q7RTY3 260 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 LILRA3Q8N6C8 439 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 L3MBTL4Q8NA19 623 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 AKAP1Q92667 903 aaKnown RBP eCLIP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 DIRAS2Q96HU8 199 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TBL1YQ9BQ87 522 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 SAV1Q9H4B6 383 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 IPPKQ9H8X2 491 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC28A3Q9HAS3 691 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 PPP1R1BQ9UD71 204 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TESQ9UGI8 421 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 A0A1W2PPL8 197 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 ANXA2P2A6NMY6 339 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 EVPLLA8MZ36 301 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 GPR31O00270 319 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 LGI1O95970 557 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 RLN2P04090 185 aa4.32□□□□□ -1.72
DEPDC1-202ENST00000456315 TRAPPC2P0DI81 140 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms