RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SLC34A3Q8N130 599 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 EID3Q8N140 333 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 RNF175Q8N4F7 328 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 OR52B6Q8NGF0 335 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 SORBS1Q9BX66 1292 aaKnown RBP16.6■□□□□ 0.25
MSH6-207ENST00000456246 C1QTNF3Q9BXJ4 246 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 ZNF717Q9BY31 904 aaPredicted RBP16.6■□□□□ 0.25
MSH6-207ENST00000456246 AHSPQ9NZD4 102 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 ZNF835Q9Y2P0 537 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 ATG4BQ9Y4P1 393 aa16.6■□□□□ 0.25
MSH6-207ENST00000456246 CCL21O00585 134 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 TFECO14948 347 aaPredicted RBP16.59■□□□□ 0.25
MSH6-207ENST00000456246 RIPK2O43353 540 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 PROM1O43490 865 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 PEX1O43933 1283 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 PRKNO60260 465 aaPredicted RBP16.59■□□□□ 0.25
MSH6-207ENST00000456246 NR2F6P10588 404 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 ALOX15P16050 662 aaPredicted RBP16.59■□□□□ 0.25
MSH6-207ENST00000456246 TAC1P20366 129 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 BSGP35613 385 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 MEOX1P50221 254 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 HK2P52789 917 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 HNRNPH2P55795 449 aaKnown RBP16.59■□□□□ 0.25
MSH6-207ENST00000456246 RNF4P78317 190 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 FOLH1Q04609 750 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 TRAF3Q13114 568 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 ADGRD1Q6QNK2 874 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 OPN5Q6U736 354 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 SPPL2CQ8IUH8 684 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 CPSF7Q8N684 471 aaKnown RBP16.59■□□□□ 0.25
MSH6-207ENST00000456246 ZFP62Q8NB50 900 aaPredicted RBP16.59■□□□□ 0.25
MSH6-207ENST00000456246 C16orf52Q8NHV5 167 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 NUBPLQ8TB37 319 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 SGCZQ96LD1 299 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 ELOVL6Q9H5J4 265 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 ZBTB26Q9HCK0 441 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 ADAM29Q9UKF5 820 aa16.59■□□□□ 0.25
MSH6-207ENST00000456246 IQANK1A0A1B0GTG1 560 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 TMEM200CA6NKL6 621 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.24
MSH6-207ENST00000456246 GPR75O95800 540 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 FAM58BPP0C7Q3 252 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 GALNSP34059 522 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 ID2Q02363 134 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 MPEG1Q2M385 716 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 SPRED3Q2MJR0 410 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 C18orf63Q68DL7 685 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 HIST2H2BCQ6DN03 193 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 OR52E8Q6IFG1 317 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 MILR1Q7Z6M3 343 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 SULF2Q8IWU5 870 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 ZNF808Q8N4W9 903 aaPredicted RBP16.58■□□□□ 0.24
MSH6-207ENST00000456246 EIF1ADQ8N9N8 165 aaKnown RBP16.58■□□□□ 0.24
MSH6-207ENST00000456246 GOLM1Q8NBJ4 401 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 PSD4Q8NDX1 1056 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 ACMSDQ8TDX5 336 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 ZNF721Q8TF20 911 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 SENP5Q96HI0 755 aaPredicted RBP16.58■□□□□ 0.24
MSH6-207ENST00000456246 FBXL20Q96IG2 436 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 CDK15Q96Q40 435 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 TSPAN10Q9H1Z9 355 aaPredicted RBP16.58■□□□□ 0.24
MSH6-207ENST00000456246 SNX6Q9UNH7 406 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 ASB4Q9Y574 426 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 CROCCQ5TZA2 2017 aa16.58■□□□□ 0.24
MSH6-207ENST00000456246 CENPEQ02224 2701 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 ARHGAP10A1A4S6 786 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 A8MT66 165 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 WWP2O00308 870 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 TMPRSS11DO60235 418 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 OR10H2O60403 315 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 GUCY1B2O75343 617 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 ETHE1O95571 254 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 IGKV3-11P04433 115 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 ESRRAP11474 423 aaPredicted RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 ABOP16442 354 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 NEK2P51955 445 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 HERVK_113P63132 956 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 ART3Q13508 389 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 RTL4Q6ZR62 310 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 RGS9BPQ6ZS82 235 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 MDGA2Q7Z553 956 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 OR4N5Q8IXE1 308 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 DND1Q8IYX4 353 aaKnown RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 OR4F6Q8NGB9 312 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 SLC22A8Q8TCC7 542 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 ZNF483Q8TF39 744 aaPredicted RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 CCDC120Q96HB5 630 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 NSUN5Q96P11 429 aaKnown RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 ERVK-6Q9BXR3 956 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 BRF2Q9HAW0 419 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 SEMA4BQ9NPR2 832 aaPredicted RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 NMRK1Q9NWW6 199 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 PSMC3IPQ9P2W1 217 aaPredicted RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 STK38LQ9Y2H1 464 aa16.57■□□□□ 0.24
MSH6-207ENST00000456246 KLF2Q9Y5W3 355 aaPredicted RBP16.57■□□□□ 0.24
MSH6-207ENST00000456246 MYOCOSA0A1B0GUC4 107 aa16.56■□□□□ 0.24
MSH6-207ENST00000456246 A0A1W2PR48 441 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms