RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 SH3BGRLO75368 114 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 CELA2AP08217 269 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 MAOAP21397 527 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 TSFMP43897 325 aaKnown RBP16.64■□□□□ 0.25
COPS7A-202ENST00000455113 HTR6P50406 440 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 AQP5P55064 265 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 LIM2P55344 173 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 ZNF33BQ06732 778 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 ZNF595Q8IYB9 648 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 SUN3Q8TAQ9 357 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 MIB2Q96AX9 1013 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 RGMAQ96B86 450 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 ZNF354BQ96LW1 612 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 NUF2Q9BZD4 464 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 TUBB1Q9H4B7 451 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 ELOVL6Q9H5J4 265 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 PRDM7Q9NQW5 492 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 SNX6Q9UNH7 406 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 TSC22D4Q9Y3Q8 395 aa16.64■□□□□ 0.25
COPS7A-202ENST00000455113 ULK1O75385 1050 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 TBX6O95947 436 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-202ENST00000455113 KRT6AP02538 564 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 KRT6BP04259 564 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 ALOX15P16050 662 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-202ENST00000455113 PTX3P26022 381 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-202ENST00000455113 KRT6CP48668 564 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 BTKQ06187 659 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 ZNF169Q14929 603 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-202ENST00000455113 SGO1Q5FBB7 561 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 DEPDC1Q5TB30 811 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 FRG2Q64ET8 278 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 SPATA21Q7Z572 469 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 FAM47BQ8NA70 645 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 Q8NA96 180 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 C7orf57Q8NEG2 295 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 PSMF1Q92530 271 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 PPP1R36Q96LQ0 422 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 FRG2BQ96QU4 278 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 SIKE1Q9BRV8 207 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.63■□□□□ 0.25
COPS7A-202ENST00000455113 OR51B5Q9H339 312 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 MMP25Q9NPA2 562 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 FARSBQ9NSD9 589 aaKnown RBP16.63■□□□□ 0.25
COPS7A-202ENST00000455113 PTGDR2Q9Y5Y4 395 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 BAHCC1Q9P281 2608 aa16.63■□□□□ 0.25
COPS7A-202ENST00000455113 A0A0G2JND7 137 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 TCRBV16S1A1N1A0A5B0 115 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 BLACEA4D250 179 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 TRPC5OSA6NMA1 111 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SAP18O00422 153 aaKnown RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 PIP5K1BO14986 540 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SNX3O60493 162 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 HIST1H1TP22492 207 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SOX11P35716 441 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 NEK2P51955 445 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 B3GNTL1Q67FW5 361 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 OR4C11Q6IEV9 310 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SCIMPQ6UWF3 145 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 HOMEZQ8IX15 550 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 DDIASQ8IXT1 998 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SLC5A8Q8N695 610 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 ACOT4Q8N9L9 421 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 WDR20Q8TBZ3 569 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 BCAS4Q8TDM0 211 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 HAS2Q92819 552 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 MTFMTQ96DP5 389 aaKnown RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 HBEGFQ99075 208 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 DMRT3Q9NQL9 472 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 MS4A12Q9NXJ0 267 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 CNTRLQ7Z7A1 2325 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 PDYNP01213 254 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 LINC00032P0C843 101 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 ATP5A1P25705 553 aaKnown RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 ARFIP1P53367 373 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SLC26A5P58743 744 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 STX4Q12846 297 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 IFT88Q13099 833 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 MEP1AQ16819 746 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 C10orf62Q5T681 223 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 EPGNQ6UW88 154 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 PIGWQ7Z7B1 504 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 SELENOMQ8WWX9 145 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 C19orf60Q96EN9 201 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 NECTIN3Q9NQS3 549 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 AGPAT4Q9NRZ5 378 aa16.62■□□□□ 0.25
COPS7A-202ENST00000455113 COPG1Q9Y678 874 aaKnown RBP16.62■□□□□ 0.25
COPS7A-202ENST00000455113 TRAV17A0A0B4J275 112 aa16.61■□□□□ 0.25
COPS7A-202ENST00000455113 SAGE2PA6NJ88 616 aa16.61■□□□□ 0.25
COPS7A-202ENST00000455113 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
COPS7A-202ENST00000455113 DIAPH2O60879 1101 aa16.61■□□□□ 0.25
COPS7A-202ENST00000455113 CPN2P22792 545 aa16.61■□□□□ 0.25
COPS7A-202ENST00000455113 TLX1P31314 330 aaPredicted RBP16.61■□□□□ 0.25
COPS7A-202ENST00000455113 RPS13P62277 151 aaKnown RBP16.61■□□□□ 0.25
COPS7A-202ENST00000455113 SLC9B1Q4ZJI4 515 aa16.61■□□□□ 0.25
COPS7A-202ENST00000455113 CISD2Q8N5K1 135 aaKnown RBP16.61■□□□□ 0.25
COPS7A-202ENST00000455113 OR1N1Q8NGS0 311 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms