RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 IL1RNP18510 177 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 RAPSNQ13702 412 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 GPAT3Q53EU6 434 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 GPR107Q5VW38 600 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 TMEM107Q6UX40 140 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 ASPGQ86U10 573 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 PHF10Q8WUB8 498 aaKnown RBP12.95□□□□□ -0.34
CLK3-203ENST00000454830 DCUN1D5Q9BTE7 237 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 GLIPR2Q9H4G4 154 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 ZNF780BQ9Y6R6 833 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 MDC1Q14676 2089 aaKnown RBP12.95□□□□□ -0.34
CLK3-203ENST00000454830 A0A1W2PR48 441 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 AIFM1O95831 613 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 IDH2P48735 452 aaKnown RBP12.95□□□□□ -0.34
CLK3-203ENST00000454830 CCDC81Q6ZN84 652 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 GIPC3Q8TF64 312 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 SLC38A5Q8WUX1 472 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 KAT2AQ92830 837 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 RERGQ96A58 199 aaPredicted RBP12.95□□□□□ -0.34
CLK3-203ENST00000454830 GSDMCQ9BYG8 508 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 ZNF556Q9HAH1 456 aa12.95□□□□□ -0.34
CLK3-203ENST00000454830 C4orf51C9J302 202 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 ADAMDEC1O15204 470 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 NDUFS2O75306 463 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 IFNW1P05000 195 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 ARAFP10398 606 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 MAGEA2P43356 314 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 RABIFP47224 123 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 ITGA1P56199 1179 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 FIGLAQ6QHK4 219 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 OOSP2Q86WS3 158 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 SGCDQ92629 289 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 GTPBP3Q969Y2 492 aaKnown RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 MAPKAP1Q9BPZ7 522 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 UBE2ZQ9H832 354 aaPredicted RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 ACTR10Q9NZ32 417 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 AP1M2Q9Y6Q5 423 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 DENND4AQ7Z401 1863 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 A0A1W2PS29 197 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 MBTPS2O43462 519 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 MAN1A2O60476 641 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 TPST2O60704 377 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 UGT2B7P16662 529 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 CPN2P22792 545 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 HNRNPFP52597 415 aaKnown RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 WDR53Q7Z5U6 358 aaPredicted RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 LGI4Q8N135 537 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 OR10G2Q8NGC3 310 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 KLHDC7BQ96G42 594 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 RDH12Q96NR8 316 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 CHST8Q9H2A9 424 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 FANCEQ9HB96 536 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 PSME2Q9UL46 239 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 GCM2O75603 506 aaPredicted RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 DRD2P14416 443 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 ITGA2P17301 1181 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 CSNK2A2P19784 350 aaPredicted RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 AHRP35869 848 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 CRYBA2P53672 197 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 SIM1P81133 766 aaPredicted RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 GPR19Q15760 415 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 SYPL1Q16563 259 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 DUSP7Q16829 419 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 BROXQ5VW32 411 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 KIAA0895LQ68EN5 471 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 B3GNT6Q6ZMB0 384 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 FEVQ99581 238 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 AICDAQ9GZX7 198 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 SEMA3GQ9NS98 782 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 TRNAU1APQ9NX07 287 aaKnown RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 USE1Q9NZ43 259 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 NDUFAF4Q9P032 175 aa12.94□□□□□ -0.34
CLK3-203ENST00000454830 TMEFF2Q9UIK5 374 aaPredicted RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 WBP11Q9Y2W2 641 aaKnown RBP12.94□□□□□ -0.34
CLK3-203ENST00000454830 A0A0A6YYD5 115 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 VILLO15195 856 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 ANGPTL1O95841 491 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 MATN1P21941 496 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 EPHA2P29317 976 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 YPEL5P62699 121 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 TUBA4AP68366 448 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 C6orf141Q5SZD1 244 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 Q6ZPB1 254 aaPredicted RBP12.93□□□□□ -0.34
CLK3-203ENST00000454830 ARMC8Q8IUR7 673 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 MFSD9Q8NBP5 474 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 AMDHD1Q96NU7 426 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 APOL4Q9BPW4 351 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 PHF7Q9BWX1 381 aaPredicted RBP12.93□□□□□ -0.34
CLK3-203ENST00000454830 STARD5Q9NSY2 213 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 ADAM29Q9UKF5 820 aa12.93□□□□□ -0.34
CLK3-203ENST00000454830 SLC13A4Q9UKG4 626 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms