RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 FCRLAQ7L513 359 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 CENPLQ8N0S6 344 aaPredicted RBP3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 PARP8Q8N3A8 854 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 MARVELD2Q8N4S9 558 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF274Q96GC6 653 aaPredicted RBP3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 CASD1Q96PB1 797 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 RAB40CQ96S21 281 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 NDUFAF3Q9BU61 184 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 NLNQ9BYT8 704 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 LRRCC1Q9C099 1032 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 BICC1Q9H694 974 aaKnown RBP3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 VIPAS39Q9H9C1 493 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 STARD5Q9NSY2 213 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 MAN2C1Q9NTJ4 1040 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 MAB21L2Q9Y586 359 aa3.67□□□□□ -1.82
HMGN3P1-201ENST00000453847 E9PMD0 336 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SGK494L7N484 410 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 MAPK13O15264 365 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SIGLEC5O15389 551 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 B4GAT1O43505 415 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 IDH1O75874 414 aaKnown RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SEC24AO95486 1093 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 ALPLP05186 524 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TPM2P07951 284 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 PAX1P15863 534 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 CTNNA2P26232 953 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 DPP4P27487 766 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMOD1P28289 359 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 PTPN6P29350 595 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 CA8P35219 290 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TRIM23P36406 574 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 DLSTP36957 453 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 FEN1P39748 380 aaKnown RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 ACADSBP45954 432 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 MTIF2P46199 727 aaKnown RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 KCNJ4P48050 445 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TDO2P48775 406 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 NANOS2P60321 138 aaKnown RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 RIGQ13278 110 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 DRP2Q13474 957 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 BTG3Q14201 252 aaPredicted RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TRIP10Q15642 601 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SHROOM1Q2M3G4 852 aaPredicted RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SLC36A3Q495N2 470 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 RTL6Q6ICC9 239 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 CBLN3Q6UW01 205 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 RBMS3Q6XE24 437 aaKnown RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 Q6ZVQ6 151 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 LPCAT2Q7L5N7 544 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 C17orf64Q86WR6 236 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZNF679Q8IYX0 411 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 CCDC185Q8N715 623 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 POC1AQ8NBT0 407 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 STEAP2Q8NFT2 490 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TMEM37Q8WXS4 190 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 PSKH2Q96QS6 385 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 RBM24Q9BX46 236 aaKnown RBP3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SLC29A3Q9BZD2 475 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 ZFP57Q9NU63 452 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 RDH8Q9NYR8 311 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 TAAR2Q9P1P5 351 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 SNX6Q9UNH7 406 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 B9D1Q9UPM9 204 aa3.66□□□□□ -1.82
HMGN3P1-201ENST00000453847 UBXN8O00124 270 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 SH2D1BO14796 132 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 SMAD6O43541 496 aaKnown RBP3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 GMFGO60234 142 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 CIDEAO60543 219 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 TBX19O60806 448 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 OAZ2O95190 189 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 ANGPTL1O95841 491 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 SLC2A2P11168 524 aaPredicted RBP3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 GP9P14770 177 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 RPL35AP18077 110 aaKnown RBP3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 OTX2P32243 289 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 CDKN2AP42771 156 aaKnown RBP3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 FHITP49789 147 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 HMGA2P52926 109 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 RPS4XP62701 263 aaKnown RBP3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 SPIBQ01892 262 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 NFATC2Q13469 925 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 RIPK1Q13546 671 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 ATAD3BQ5T9A4 648 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 NIPAL3Q6P499 406 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 C9orf139Q6ZV77 190 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 TRPT1Q86TN4 253 aaKnown RBP3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 DCLK2Q8N568 766 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 COLGALT1Q8NBJ5 622 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 DMBX1Q8NFW5 382 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 C8orf46Q8TAG6 207 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 RNF139Q8WU17 664 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 GATAD1Q8WUU5 269 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 NUDCD2Q8WVJ2 157 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 CD101Q93033 1021 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 COG3Q96JB2 828 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 LRR1Q96L50 414 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 ZNF354BQ96LW1 612 aa3.65□□□□□ -1.83
HMGN3P1-201ENST00000453847 DUX5Q96PT3 197 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms