RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SH3D21A4FU49 640 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SYN3O14994 580 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 PRMT3O60678 531 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 DUSP11O75319 330 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SCG5P05408 212 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 URODP06132 367 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 IL3P08700 152 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 GJA1P17302 382 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 RHCEP18577 417 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 DGKGP49619 791 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 BICRALQ6AI39 1079 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 MTFR2Q6P444 385 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SMARCD3Q6STE5 483 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 CHMP1BQ7LBR1 199 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 RBM45Q8IUH3 476 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SYNPOQ8N3V7 929 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 NATD1Q8N6N6 113 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 REPS1Q96D71 796 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SIPA1Q96FS4 1042 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 ABCG5Q9H222 651 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 C12orf4Q9NQ89 552 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 LHX3Q9UBR4 397 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 MGAT4AQ9UM21 535 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 A0A075B6Q4 140 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CSNK1DP48730 415 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ACLYP53396 1101 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 AP1S2P56377 157 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CTBP2P56545 445 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 PXDC1Q5TGL8 231 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SAXO2Q658L1 398 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SIGIRRQ6IA17 410 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 REEP3Q6NUK4 255 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CRTC1Q6UUV9 634 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CD300LGQ6UXG3 332 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 IL20RBQ6UXL0 311 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 MACC1Q6ZN28 852 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CACUL1Q86Y37 369 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 LILRA3Q8N6C8 439 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF366Q8N895 744 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 FATE1Q969F0 183 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 QRFPRQ96P65 431 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF607Q96SK3 696 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 BARHL1Q9BZE3 327 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 KCNK12Q9HB15 430 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZFR2Q9UPR6 939 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SIP14410 1827 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF840PA6NDX5 716 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 A8MUA0 341 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF670-ZNF695F2Z2N8 137 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 M0R3H8 397 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ADAM12O43184 909 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ETHE1O95571 254 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 OSMP13725 252 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 NNMTP40261 264 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 RPS5P46782 204 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 TAS2R41P59536 307 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 TMEM220Q6QAJ8 160 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 TPRG1Q6ZUI0 275 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 COMMD6Q7Z4G1 85 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 AKAP1Q92667 903 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 TADA1Q96BN2 335 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ACER3Q9NUN7 267 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 EEF1E1O43324 174 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SCO2O43819 266 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 RAB36O95755 333 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CYP2A6P11509 494 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC38A6Q8IZM9 456 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 OR52N2Q8NGI0 321 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 WDR48Q8TAF3 677 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 WFDC5Q8TCV5 224 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 MED30Q96HR3 178 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 BBS4Q96RK4 519 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 SUV39H2Q9H5I1 410 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 TSPAN6O43657 245 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 IDSP22304 550 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 EFR3AQ14156 821 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF730Q6ZMV8 503 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 Q6ZVU0 165 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.22□□□□□ -0.294e-11■□□□□ 10.1
UBE2D3-210ENST00000453744 CHAC2Q8WUX2 184 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 RIPOR3Q96MK2 946 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 TTTY10Q9BZA0 68 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 ENAMQ9NRM1 1142 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CNOT2Q9NZN8 540 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
UBE2D3-210ENST00000453744 A0A1W2PPK0 400 aa13.21□□□□□ -0.29
UBE2D3-210ENST00000453744 ERVH48-1M5A8F1 160 aa13.21□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF780AO75290 641 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms