RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LGSNQ5TDP6 509 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 VWA5B1Q5TIE3 1220 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 NSUN5P2Q63ZY6 315 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TWF2Q6IBS0 349 aaKnown RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLEKHA7Q6IQ23 1121 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TCTN3Q6NUS6 607 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF585AQ6P3V2 769 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 DOK6Q6PKX4 331 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 VSTM1Q6UX27 236 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 MAVSQ7Z434 540 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 DTX2Q86UW9 622 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 GABRG1Q8N1C3 465 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 C12orf76Q8N812 135 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 EXD3Q8N9H8 876 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SYT14Q8NB59 555 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PROKR2Q8NFJ6 384 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF398Q8TD17 642 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ARNTL2Q8WYA1 636 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ING5Q8WYH8 240 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ST8SIA1Q92185 356 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ELMO1Q92556 727 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 LPAR1Q92633 364 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SENP5Q96HI0 755 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF582Q96NG8 517 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 CASD1Q96PB1 797 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SNX18Q96RF0 628 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TGS1Q96RS0 853 aaKnown RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZSWIM1Q9BR11 485 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TSSK1BQ9BXA7 367 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PRRG4Q9BZD6 226 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TM6SF1Q9BZW5 370 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 DCLK3Q9C098 648 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SEMA4CQ9C0C4 833 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 DRC3Q9H069 523 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZMYND12Q9H0C1 365 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RAB1BQ9H0U4 201 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SAV1Q9H4B6 383 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ELOVL6Q9H5J4 265 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZDHHC6Q9H6R6 413 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RANBP3Q9H6Z4 567 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SMYD3Q9H7B4 428 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 MCCC2Q9HCC0 563 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TXNRD2Q9NNW7 524 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 HINT3Q9NQE9 182 aaKnown RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF302Q9NR11 478 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ACSS1Q9NUB1 689 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RNF181Q9P0P0 153 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SENP1Q9P0U3 644 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 RCOR3Q9P2K3 495 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 NDRG3Q9UGV2 375 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 DCDC2Q9UHG0 476 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PSORS1C1Q9UIG5 152 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 PSMD13Q9UNM6 376 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZFR2Q9UPR6 939 aaKnown RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 SATB2Q9UPW6 733 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 B3GALT5Q9Y2C3 310 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 TCAF1Q9Y4C2 921 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 HEMK1Q9Y5R4 338 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 KLF2Q9Y5W3 355 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 NPTNQ9Y639 398 aa4.13□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A1B0GTW7 788 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A1B0GUA9 196 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 LOC390937A0A1W2PQ73 354 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 A0A1W2PRB8 838 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 WDR91A4D1P6 747 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 DDTLA6NHG4 134 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 FBLL1A6NHQ2 334 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 A6NNC1 897 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 WASHC1A8K0Z3 465 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM150CB9EJG8 249 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 C1QTNF3-AMACRE9PGA6 284 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 I6L893 689 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 J3QR06 171 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CLDN5O00501 218 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 NDUFAB1O14561 156 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CHEK1O14757 476 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 FPGTO14772 594 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CHUKO15111 745 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 STX7O15400 261 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 KCNN4O15554 427 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZSCAN12O43309 604 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MSI1O43347 362 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF623O75123 536 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCNB2O95067 398 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 AHSA1O95433 338 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 IGHV2-70P01814 119 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 FCER2P06734 321 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 RETP07949 1114 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 DARSP14868 501 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 CPN1P15169 458 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 BMP5P22003 454 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 PSMA2P25787 234 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 IL12BP29460 328 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 YWHABP31946 246 aaKnown RBP4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 MMP15P51511 669 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 TPTEP56180 551 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 IRF8Q02556 426 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLA2G7Q13093 441 aa4.12□□□□□ -1.75
HMGB3P21-201ENST00000452483 PMS2P3Q13401 168 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms