RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TRIM46Q7Z4K8 759 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 NUDCD3Q8IVD9 361 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 HOMEZQ8IX15 550 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 FAM26EQ8N5C1 309 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 C1orf52Q8N6N3 182 aaKnown RBP18.65■□□□□ 0.58
COL9A3-202ENST00000452372 Q8NA96 180 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 NFAM1Q8NET5 270 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-202ENST00000452372 WDR41Q9HAD4 459 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 EML4Q9HC35 981 aaKnown RBP18.65■□□□□ 0.58
COL9A3-202ENST00000452372 ZBTB20Q9HC78 741 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-202ENST00000452372 ADAP2Q9NPF8 381 aa18.65■□□□□ 0.58
COL9A3-202ENST00000452372 PNO1Q9NRX1 252 aaKnown RBP18.65■□□□□ 0.58
COL9A3-202ENST00000452372 TTLL8A6PVC2 850 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 AZIN1O14977 448 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 CHRNGP07510 517 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 H2AFXP16104 143 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-202ENST00000452372 PPP2R1BP30154 601 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 SOX11P35716 441 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 IGLV3-21P80748 117 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-202ENST00000452372 HMGCS1Q01581 520 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 CLEC6AQ6EIG7 209 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 H3F3CQ6NXT2 135 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 SIRT6Q8N6T7 355 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 RBMXL3Q8N7X1 1067 aaKnown RBP18.64■□□□□ 0.57
COL9A3-202ENST00000452372 ELP5Q8TE02 316 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 TM9SF4Q92544 642 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 TLCD1Q96CP7 247 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 PTGFRNQ9P2B2 879 aa18.64■□□□□ 0.57
COL9A3-202ENST00000452372 PPIEQ9UNP9 301 aaKnown RBP18.64■□□□□ 0.57
COL9A3-202ENST00000452372 FGF17O60258 216 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 GUCY1B2O75343 617 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 PRKRAO75569 313 aaKnown RBP18.63■□□□□ 0.57
COL9A3-202ENST00000452372 AIFM1O95831 613 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 NR2F6P10588 404 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 MAPK12P53778 367 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 TRA2BP62995 288 aaKnown RBP18.63■□□□□ 0.57
COL9A3-202ENST00000452372 MFAP5Q13361 173 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 ELAVL1Q15717 326 aaKnown RBP18.63■□□□□ 0.57
COL9A3-202ENST00000452372 SPIN4Q56A73 249 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 OR4N5Q8IXE1 308 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 TMEM132CQ8N3T6 1108 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 B3GNT7Q8NFL0 401 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 CPT1CQ8TCG5 803 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 TM4SF18Q96CE8 201 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 C11orf24Q96F05 449 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-202ENST00000452372 APIPQ96GX9 242 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 PKNOX2Q96KN3 472 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 KCNK13Q9HB14 408 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 SIRT5Q9NXA8 310 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 TEX10Q9NXF1 929 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-202ENST00000452372 MCM8Q9UJA3 840 aa18.63■□□□□ 0.57
COL9A3-202ENST00000452372 MYOCOSA0A1B0GUC4 107 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 WDR91A4D1P6 747 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 WASHC1A8K0Z3 465 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 A8MUI8 341 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 MYO1DO94832 1006 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 GPR75O95800 540 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 IFNA16P05015 189 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 GNLYP22749 145 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 ARRB2P32121 409 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 GPR143P51810 404 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 SLC18A1P54219 525 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 MAGOHP61326 146 aaKnown RBP18.62■□□□□ 0.57
COL9A3-202ENST00000452372 ID2Q02363 134 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 FOLH1Q04609 750 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 ACSM2AQ08AH3 577 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 NDUFAF5Q5TEU4 345 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 KANK2Q63ZY3 851 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 B3GNTL1Q67FW5 361 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-202ENST00000452372 ACSM2BQ68CK6 577 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 GALNT18Q6P9A2 607 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 LINC00696Q6ZRV3 163 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 RNF165Q6ZSG1 346 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 HDXQ7Z353 690 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 ATCAYQ86WG3 371 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 CLYBLQ8N0X4 340 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 ZADH2Q8N4Q0 377 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 GALNT11Q8NCW6 608 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 EPS8L2Q9H6S3 715 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 TEKT2Q9UIF3 430 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 TRAF6Q9Y4K3 522 aa18.62■□□□□ 0.57
COL9A3-202ENST00000452372 CPAMD8Q8IZJ3 1885 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 GLOD5A6NK44 160 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 PGRMC2O15173 223 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 CHEK2O96017 543 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 STT3AP46977 705 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 RAE1P78406 368 aaKnown RBP18.61■□□□□ 0.57
COL9A3-202ENST00000452372 BTKQ06187 659 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 IMPG1Q17R60 797 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 PRR30Q53SZ7 412 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-202ENST00000452372 SPDYAQ5MJ70 313 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 AGBL2Q5U5Z8 902 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 OR52E8Q6IFG1 317 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 APCDD1LQ8NCL9 501 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 PPP1R14CQ8TAE6 165 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 DNAJB14Q8TBM8 379 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 PTPMT1Q8WUK0 201 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-202ENST00000452372 DAZLQ92904 295 aaKnown RBP18.61■□□□□ 0.57
COL9A3-202ENST00000452372 UCN3Q969E3 161 aa18.61■□□□□ 0.57
COL9A3-202ENST00000452372 RBM18Q96H35 190 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms