RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 TRPM5Q9NZQ8 1165 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 H2AFY2Q9P0M6 372 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 GALPQ9UBC7 116 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 OR12D3Q9UGF7 316 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 NUFIP1Q9UHK0 495 aaKnown RBP3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 ELF5Q9UKW6 265 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 UBQLN1Q9UMX0 589 aaKnown RBP3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 ABCG2Q9UNQ0 655 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 RABL2BQ9UNT1 228 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 CFL2Q9Y281 166 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 ITM2BQ9Y287 266 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 LSM2Q9Y333 95 aaKnown RBP3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 PCDHGB3Q9Y5G1 929 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 ORC6Q9Y5N6 252 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 AP1M2Q9Y6Q5 423 aa3.96□□□□□ -1.78
HMGB3P22-202ENST00000451823 TNS1Q9HBL0 1735 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PLXNB2O15031 1838 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PATJQ8NI35 1801 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 EVPLQ92817 2033 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PAPPA2Q9BXP8 1791 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 A0A1W2PQ09 198 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 KRT87PA6NCN2 255 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CBX4O00257 560 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CDC7O00311 574 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PLK4O00444 970 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 WNT10BO00744 389 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 OR7A17O14581 309 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GNGT2O14610 69 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PER2O15055 1255 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 NDUFA2O43678 99 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 KIAA0513O60268 411 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TMCC2O75069 709 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 VPS26AO75436 327 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MTRF1O75570 445 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GPX5O75715 221 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RPP40O75818 363 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 WDR47O94967 919 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CCNDBP1O95273 360 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PTHP01270 115 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 EPOP01588 193 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 C9P02748 559 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 DNTTP04053 509 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 IL6P05231 212 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CSF3P09919 207 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SLC2A3P11169 496 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CYP2A6P11509 494 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PIPP12273 146 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MAGP20916 626 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ENPP1P22413 925 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 C21orf33P30042 268 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 HLA-FP30511 346 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 FMO4P31512 558 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 APOBEC3AP31941 199 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TALDO1P37837 337 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PNPLA4P41247 253 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ALDH9A1P49189 494 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 AGTR2P50052 363 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 STC1P52823 247 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ZNF280AP59817 542 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 OLR1P78380 273 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RHAGQ02094 409 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PPP1R8Q12972 351 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MRPL49Q13405 166 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 KCNC3Q14003 757 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TSNQ15631 228 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 HKDC1Q2TB90 917 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TIMM50Q3ZCQ8 353 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GTDC1Q4AE62 458 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RFTN2Q52LD8 501 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ARMCX4Q5H9R4 360 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TOR2AQ5JU69 321 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SPANXN2Q5MJ10 180 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 C10orf62Q5T681 223 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 FAM205BPQ63HN1 556 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ZNF782Q6ZMW2 699 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 MSANTD1Q6ZTZ1 278 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 LRRC8DQ7L1W4 858 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 EIF3MQ7L2H7 374 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GPRIN1Q7Z2K8 1008 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 KCTD20Q7Z5Y7 419 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GALNT5Q7Z7M9 940 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 SERPINA11Q86U17 422 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 LDB1Q86U70 411 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 TAC4Q86UU9 113 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 LRRTM3Q86VH5 581 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ZDHHC21Q8IVQ6 265 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 UMODL1-AS1Q8N2C9 162 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 ATPAF2Q8N5M1 289 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 LILRA3Q8N6C8 439 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 CDYL2Q8N8U2 506 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 RTL3Q8N8U3 475 aaKnown RBP3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 PNPLA1Q8N8W4 532 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 GDPD1Q8N9F7 314 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 FNDC5Q8NAU1 212 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 BEND2Q8NDZ0 799 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 DENND6BQ8NEG7 585 aa3.95□□□□□ -1.78
HMGB3P22-202ENST00000451823 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms