RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MARCOQ9UEW3 520 aaPredicted RBP16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 DNAJC15Q9Y5T4 150 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 USP9XQ93008 2570 aaPredicted RBP16■□□□□ 0.15
PRPF40A-204ENST00000450303 PCDH17O14917 1159 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 CHST10O43529 356 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 RGS14O43566 566 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 GALR3O60755 368 aaPredicted RBP16■□□□□ 0.15
PRPF40A-204ENST00000450303 DNAJC8O75937 253 aaPredicted RBP16■□□□□ 0.15
PRPF40A-204ENST00000450303 CBX6O95503 412 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 PDYNP01213 254 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 PTX3P26022 381 aaPredicted RBP16■□□□□ 0.15
PRPF40A-204ENST00000450303 SOX11P35716 441 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 STXBP1P61764 594 aaKnown RBP16■□□□□ 0.15
PRPF40A-204ENST00000450303 HERC3Q15034 1050 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 TLR1Q15399 786 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 UGT3A2Q3SY77 523 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 TOR1AIP1Q5JTV8 583 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 CHSY3Q70JA7 882 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16■□□□□ 0.15
PRPF40A-204ENST00000450303 HUS1BQ8NHY5 278 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 UTP15Q8TED0 518 aaKnown RBP16■□□□□ 0.15
PRPF40A-204ENST00000450303 SERPINI1Q99574 410 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 PPT2Q9UMR5 302 aa16■□□□□ 0.15
PRPF40A-204ENST00000450303 CPAMD8Q8IZJ3 1885 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 DYTNA2CJ06 578 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 CFAP73A6NFT4 308 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 A8MUI8 341 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 TMEM233B4DJY2 109 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 B4GALT2O60909 372 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 SKAP2O75563 359 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 ATP5HO75947 161 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 SERPINA6P08185 405 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 TSFMP43897 325 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 ST13P50502 369 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 NEK2P51955 445 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 RHAGQ02094 409 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 TGM3Q08188 693 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 HYAL2Q12891 473 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 PDCD2Q16342 344 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 BTBD16Q32M84 506 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 FCRLBQ6BAA4 426 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 RIPOR1Q6ZS17 1223 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 SRFBP1Q8NEF9 429 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 GRHL3Q8TE85 626 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 TSLPQ969D9 159 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 MTERF1Q99551 399 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 AICDAQ9GZX7 198 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 DMRT3Q9NQL9 472 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 LANCL2Q9NS86 450 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 AHSPQ9NZD4 102 aa15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 C19orf25Q9UFG5 118 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-204ENST00000450303 ANKUB1A6NFN9 424 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 MAGEB17A8MXT2 336 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 C4orf51C9J302 202 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 PIP5K1BO14986 540 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 WDPCPO95876 746 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 RNF224P0DH78 156 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 ICAM2P13598 275 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 HTR6P50406 440 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 RPS13P62277 151 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 BTKQ06187 659 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 ABRAXAS2Q15018 415 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 NSDHLQ15738 373 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 SFT2D3Q587I9 215 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 TCHHL1Q5QJ38 904 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 SCIMPQ6UWF3 145 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 ABHD13Q7L211 337 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 TRIM46Q7Z4K8 759 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 PLPP5Q8NEB5 264 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 CREB3L4Q8TEY5 395 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 PSMG3-AS1Q96PY0 264 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 NUF2Q9BZD4 464 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 SLC6A16Q9GZN6 736 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 NPHS2Q9NP85 383 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 AGPAT4Q9NRZ5 378 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 FARSBQ9NSD9 589 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 SLC12A4Q9UP95 1085 aa15.98■□□□□ 0.15
PRPF40A-204ENST00000450303 UTP20O75691 2785 aaKnown RBP15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 SVILO95425 2214 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 A0A0G2JN53 185 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 FAM227AF5H4B4 570 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 TGFB1P01137 390 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 FHP07954 510 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 LINC00032P0C843 101 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 SMIM10L1P0DMW3 83 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 RAP1GDS1P52306 607 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 BTG2P78543 158 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 SF3A3Q12874 501 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 CUL3Q13618 768 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 ELOAQ14241 798 aaKnown RBP15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 TMEM35AQ53FP2 167 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 PAPD4Q6PIY7 484 aaKnown RBP15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 ACAD11Q709F0 780 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 HAS2Q92819 552 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 TBC1D20Q96BZ9 403 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 SMIM10Q96HG1 83 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 PPP3R2Q96LZ3 170 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 OR1F2PQ96R84 312 aa15.97■□□□□ 0.15
PRPF40A-204ENST00000450303 BARD1Q99728 777 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms