RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 OVOL3O00110 214 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 CD3EAPO15446 510 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 OR1F1O43749 312 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 SMNDC1O75940 238 aaKnown RBP eCLIP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 IFNA16P05015 189 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 ADRA1DP25100 572 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 UGT2B10P36537 528 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 RPL21P46778 160 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 CASP9P55211 416 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 HSD17B7P56937 341 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 RAB8AP61006 207 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC13A2Q13183 592 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 DHX34Q14147 1143 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 OASLQ15646 514 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 ELAVL1Q15717 326 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 MPEG1Q2M385 716 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 TMEM249Q2WGJ8 235 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 AADACL2Q6P093 401 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 PLXDC2Q6UX71 529 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 SCUBE1Q8IWY4 988 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 MORN4Q8NDC4 146 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 UTP15Q8TED0 518 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 WNT2BQ93097 391 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 GTPBP3Q969Y2 492 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 RHNO1Q9BSD3 238 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 DOHHQ9BU89 302 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 OR8D2Q9GZM6 311 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 ZNF281Q9Y2X9 895 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 MED12Q93074 2177 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 MED12LQ86YW9 2145 aa11.47□□□□□ -0.57
AC004540.1-204ENST00000449537 CTAGE15A4D2H0 777 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 URADA6NGE7 173 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 LRRC14BA6NHZ5 514 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 C16orf97H3BN30 126 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 GFYI3L273 518 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 ZBTB14O43829 449 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 NIPSNAP2O75323 286 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 METTL18O95568 372 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 PLAUP00749 431 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 HPNP05981 417 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CTAGE8P0CG41 777 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 IMPA1P29218 277 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 FMO4P31512 558 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 HNF4AP41235 474 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CDK9P50750 372 aaKnown RBP11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 ASPHQ12797 758 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 KCNJ11Q14654 390 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 BEX5Q5H9J7 111 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CTSL3PQ5NE16 218 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CYB5R2Q6BCY4 276 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 DNM1P46Q6ZS02 220 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CTAGE6Q86UF2 777 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CTAGE4Q8IX94 777 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CA13Q8N1Q1 262 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 ARIH2OSQ8N7S6 290 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 PRELID2Q8N945 189 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 SPATA4Q8NEY3 305 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 OR52K1Q8NGK4 314 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 TNFRSF13CQ96RJ3 184 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 SLC39A3Q9BRY0 314 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 ELOVL5Q9NYP7 299 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 SH2B3Q9UQQ2 575 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 CLDN16Q9Y5I7 305 aa11.46□□□□□ -0.57
AC004540.1-204ENST00000449537 NOTCH1P46531 2555 aa11.46□□□□□ -0.58
AC004540.1-204ENST00000449537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 H3BMM5 538 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 TGFBR3LH3BV60 316 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 UBFD1O14562 309 aaKnown RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 LMX1BO60663 402 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 CDH1P12830 882 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 POU2F1P14859 743 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 TNNI3P19429 210 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 CDH17Q12864 832 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 SQLEQ14534 574 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 TOMM20Q15388 145 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 FAM174BQ3ZCQ3 159 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 DCST1Q5T197 706 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 SCIMPQ6UWF3 145 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 TBC1D19Q8N5T2 526 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 ZNF321PQ8N8H1 164 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 CCDC89Q8N998 374 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 FAM13CQ8NE31 585 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 NT5CQ8TCD5 201 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 PTPMT1Q8WUK0 201 aaPredicted RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 ASB11Q8WXH4 323 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 SPACA9Q96E40 222 aaPredicted RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 MS4A14Q96JA4 679 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 ZNF597Q96LX8 424 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 BIRC8Q96P09 236 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 TUBA1CQ9BQE3 449 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 GALPQ9UBC7 116 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 IKBKGQ9Y6K9 419 aa11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
AC004540.1-204ENST00000449537 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.44□□□□□ -0.58
AC004540.1-204ENST00000449537 TCRBV7S2A1N4TA0A589 114 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms