RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 HAS2Q92819 552 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 ANKRD9Q96BM1 317 aaPredicted RBP23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 IQCGQ9H095 443 aaKnown RBP23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 CDCP1Q9H5V8 836 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 RPF2Q9H7B2 306 aaKnown RBP23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 MS4A12Q9NXJ0 267 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 AHSPQ9NZD4 102 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 ASB4Q9Y574 426 aa23.37■■□□□ 1.33
HTATSF1-203ENST00000448450 WASHC1A8K0Z3 465 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 PROM1O43490 865 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 KRT6AP02538 564 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 KRT6BP04259 564 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 TNNI3P19429 210 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 TLX1P31314 330 aaPredicted RBP23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 KRT6CP48668 564 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 PER3P56645 1201 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 TNFRSF17Q02223 184 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 MEP1AQ16819 746 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 CFAP157Q5JU67 520 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 C1QL3Q5VWW1 255 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 MRM1Q6IN84 353 aaKnown RBP23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 BEST3Q8N1M1 668 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 SLC5A8Q8N695 610 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 BANPQ8N9N5 519 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 B3GNT7Q8NFL0 401 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 UCN3Q969E3 161 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 APOPT1Q96IL0 206 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 KCNA7Q96RP8 456 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 MID1IP1Q9NPA3 183 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 ADAP2Q9NPF8 381 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 OXSMQ9NWU1 459 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 LYARQ9NX58 379 aaKnown RBP23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 STK38LQ9Y2H1 464 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 PLLPQ9Y342 182 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 TIMM22Q9Y584 194 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 APCP25054 2843 aa23.36■■□□□ 1.33
HTATSF1-203ENST00000448450 A0A1W2PR48 441 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 GLOD5A6NK44 160 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 FGF17O60258 216 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 BUD31P41223 144 aaPredicted RBP23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 TNFSF10P50591 281 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 PKNOX1P55347 436 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 KRT71Q3SY84 523 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 RPS19BP1Q86WX3 136 aaKnown RBP23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 C10orf107Q8IVU9 208 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 METTL4Q8N3J2 472 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 THAP3Q8WTV1 239 aaPredicted RBP23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 SREK1Q8WXA9 508 aaKnown RBP23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 NCLNQ969V3 563 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 DEFB126Q9BYW3 111 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 ANKRD10Q9NXR5 420 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 VTI1BQ9UEU0 232 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 CLCA3PQ9Y6N3 262 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 CROCCQ5TZA2 2017 aa23.35■■□□□ 1.33
HTATSF1-203ENST00000448450 TRBV11-1A0A0K0K1C0 115 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 UBFD1O14562 309 aaKnown RBP23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 ULK1O75385 1050 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 CHN1P15882 459 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 HTR6P50406 440 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 DNAJB13P59910 316 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 SERTAD2Q14140 314 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 ELAVL1Q15717 326 aaKnown RBP23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 CCNYL2Q5T2Q4 361 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 SCIMPQ6UWF3 145 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 TMEM132CQ8N3T6 1108 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 AGAP11Q8TF27 550 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 TANKQ92844 425 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 TMEM109Q9BVC6 243 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 SHCBP1LQ9BZQ2 653 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 BRF2Q9HAW0 419 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 CSMD1Q96PZ7 3565 aa23.34■■□□□ 1.33
HTATSF1-203ENST00000448450 OTOGQ6ZRI0 2925 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 ARHGAP10A1A4S6 786 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 OR5H15A6NDH6 313 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 ESRRBO95718 433 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 ENO1P06733 434 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 TUBBP07437 444 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 CREB1P16220 341 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 TPP2P29144 1249 aaPredicted RBP23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 CLCN2P51788 898 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 FOLH1Q04609 750 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 TERF2Q15554 542 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 PAGE2Q7Z2X7 111 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 APCDD1LQ8NCL9 501 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 PTPMT1Q8WUK0 201 aaPredicted RBP23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 PPWD1Q96BP3 646 aaKnown RBP23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 FAM111AQ96PZ2 611 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 SMC6Q96SB8 1091 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 RNF32Q9H0A6 362 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 NMRK1Q9NWW6 199 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 ABI3Q9P2A4 366 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 SLC17A7Q9P2U7 560 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 MID2Q9UJV3 735 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 SVILO95425 2214 aa23.33■■□□□ 1.33
HTATSF1-203ENST00000448450 TRAV17A0A0B4J275 112 aa23.32■■□□□ 1.32
HTATSF1-203ENST00000448450 C17orf105B2RV13 164 aa23.32■■□□□ 1.32
HTATSF1-203ENST00000448450 AIFM1O95831 613 aa23.32■■□□□ 1.32
HTATSF1-203ENST00000448450 NR2F6P10588 404 aa23.32■■□□□ 1.32
HTATSF1-203ENST00000448450 GPR143P51810 404 aa23.32■■□□□ 1.32
HTATSF1-203ENST00000448450 FOXA1P55317 472 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms