RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FOXM1Q08050 763 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 KCNJ11Q14654 390 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ENPP6Q6UWR7 440 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 NUDT13Q86X67 352 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM199Q8N511 208 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SLC44A5Q8NCS7 719 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 HSPBAP1Q96EW2 488 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 UBL7Q96S82 380 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SLC35A5Q9BS91 424 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 NAA11Q9BSU3 229 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 WDR26Q9H7D7 661 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 BPIFA1Q9NP55 256 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 YARS2Q9Y2Z4 477 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 B3GALT1Q9Y5Z6 326 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 IRS2Q9Y4H2 1338 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SLC1A7O00341 560 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 LIASO43766 372 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 FMO6PO60774 539 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ICAM1P05362 532 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 FABP1P07148 127 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GCSHP23434 173 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PPT1P50897 306 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 MLLT10P55197 1068 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PPP4CP60510 307 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 HERVK_113P62684 666 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GPR68Q15743 365 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ANKRD46Q86W74 232 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 TMPRSS12Q86WS5 348 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 RNF157Q96PX1 679 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 UHRF1Q96T88 793 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 FTHL17Q9BXU8 183 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 NMUR2Q9GZQ4 415 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GBA3Q9H227 469 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 LOC102723532A0A0G2JNH3 316 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 XKRY2A2RUG3 117 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 TLX2O43763 284 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 MT-ND4LP03901 98 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 RFX5P48382 616 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 RPS14P62263 151 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 FLI1Q01543 452 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GRIN2CQ14957 1233 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ADGRF3Q8IZF5 1079 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 OR2A12Q8NGT7 310 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CPB2Q96IY4 423 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 LENG8Q96PV6 779 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 TRIB1Q96RU8 372 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 MKRN2Q9H000 416 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 METTL7AQ9H8H3 244 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ZDHHC3Q9NYG2 299 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SLC6A5Q9Y345 797 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PTPRJQ12913 1337 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 HAS3O00219 553 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ADAM12O43184 909 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ENSAO43768 121 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 S100A8P05109 93 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SNRNP70P08621 437 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PRKACGP22612 351 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PRDX5P30044 214 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GABRA2P47869 451 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ARHGAP1Q07960 439 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 HIST2H3AQ71DI3 136 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ADIPOR2Q86V24 386 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 OR51Q1Q8NH59 317 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ATF6BQ99941 703 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 ACP6Q9NPH0 428 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 AIG1Q9NVV5 245 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 BLOC1S5-TXNDC5H3BN57 136 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 FAAHO00519 579 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 AKR1A1P14550 325 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 NFYAP23511 347 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 HOXD11P31277 338 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 AMTP48728 403 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CFAP77Q6ZQR2 320 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 MTURNQ8N3F0 131 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 KDM1BQ8NB78 822 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 BBS10Q8TAM1 723 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GRHL3Q8TE85 626 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PELOQ9BRX2 385 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SLC32A1Q9H598 525 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 FBRSL1Q9HCM7 1045 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 POLHQ9Y253 713 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CCL15-CCL14A0A0B4J2E2 113 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CRYM-AS1A6NIL9 109 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 EEF1E1-BLOC1S5C9J1V9 151 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 GLB1P16278 677 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 AK4P27144 223 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CCL15Q16663 113 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 NADK2Q4G0N4 442 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CDONQ4KMG0 1287 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 IL17RCQ8NAC3 791 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 DNERQ8NFT8 737 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 DHRS9Q9BPW9 319 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 KATNB1Q9BVA0 655 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 CREBZFQ9NS37 354 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 PTTG3PQ9NZH4 202 aa8.62□□□□□ -1.03
NIPBL-202ENST00000448238 SCN1AP35498 2009 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms