RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 INTS12Q96CB8 462 aaKnown RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 LLPHQ9BRT6 129 aaKnown RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 MRI1Q9BV20 369 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 CINPQ9BW66 212 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 DDX28Q9NUL7 540 aaKnown RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 FBXO2Q9UK22 296 aaPredicted RBP4.45□□□□□ -1.7
SDCBP-205ENST00000447267 USP22Q9UPT9 525 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 PCDHA3Q9Y5H8 950 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 LYSTQ99698 3801 aa4.45□□□□□ -1.7
SDCBP-205ENST00000447267 ARHGAP21Q5T5U3 1957 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 A0A0J9YY10 115 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 FEZF1A0PJY2 475 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CCDC189A1A4V9 331 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 GOLGA6L4A6NEF3 574 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 GOLGA6L9A6NEM1 432 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 FRG2CA6NGY1 282 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 LRRC14BA6NHZ5 514 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 K7EIL1 84 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 PLXNB1O43157 2135 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 TUBB4AP04350 444 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 PAX7P23759 505 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CASP1P29466 404 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CD79BP40259 229 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 SLCO1A2P46721 670 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 PAPOLAP51003 745 aaKnown RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 SCAND1P57086 179 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 TAS2R50P59544 299 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 AP1S1P61966 158 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 HMGN5P82970 282 aaKnown RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 MAT1AQ00266 395 aaKnown RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 NSUN2Q08J23 767 aaKnown RBP eCLIP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 TMEM115Q12893 351 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 MEA1Q16626 185 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 NRF1Q16656 503 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CA9Q16790 459 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 KLHL22Q53GT1 634 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 TOR2AQ5JU69 321 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF569Q5MCW4 686 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 MFSD4BQ5TF39 518 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CCDC181Q5TID7 509 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF474Q6S9Z5 364 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 C17orf107Q6ZR85 190 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 RGS9BPQ6ZS82 235 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF771Q7L3S4 317 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ANKRD37Q7Z713 158 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 AMIGO1Q86WK6 493 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 GCNT2Q8N0V5 402 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 PYROXD2Q8N2H3 581 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 PQLC1Q8N2U9 271 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 AFAP1L2Q8N4X5 818 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 WDTC1Q8N5D0 677 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 LMNTD1Q8N9Z9 388 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 FAM184AQ8NB25 1140 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 MNS1Q8NEH6 495 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ACVR1CQ8NER5 493 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF397Q8NF99 534 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 MUC7Q8TAX7 377 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 DENND1AQ8TEH3 1009 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 C22orf15Q8WYQ4 148 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 DDB2Q92466 427 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 GLYATL1Q969I3 302 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 C18orf8Q96DM3 657 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 TBC1D31Q96DN5 1066 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 HSPBAP1Q96EW2 488 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 RAX2Q96IS3 184 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 RBM41Q96IZ5 413 aaKnown RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 RMDN2Q96LZ7 410 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 TTC1Q99614 292 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CITED1Q99966 193 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 CACNG6Q9BXT2 260 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 VN1R1Q9GZP7 353 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 ACP6Q9NPH0 428 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 FZD10Q9ULW2 581 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 FRMD4BQ9Y2L6 1034 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 COQ4Q9Y3A0 265 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 PPIL1Q9Y3C6 166 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.44□□□□□ -1.7
SDCBP-205ENST00000447267 COLEC10Q9Y6Z7 277 aa4.44□□□□□ -1.7
SDCBP-205ENST00000447267 LOC105369274A0A096LPK9 316 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 C15orf38-AP3S2A0A0A6YYH1 394 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 LOC102723532A0A0G2JNH3 316 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 OR2AG2A6NM03 316 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 VWC2LB2RUY7 222 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 GPR89AB7ZAQ6 455 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 C16orf97H3BN30 126 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 HCN1O60741 890 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 PHF2O75151 1096 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 ULK1O75385 1050 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 IPO7O95373 1038 aaKnown RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 FTCDO95954 541 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 BMP15O95972 392 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 AMY1AP04745 511 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 RFPL3SP0C7P2 107 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 GPR89BP0CG08 455 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 MAGP20916 626 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 MMP8P22894 467 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 GCSHP23434 173 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 TBXAS1P24557 533 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 NDUFS1P28331 727 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms