RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	HTATIP2	Q9BUP3	242 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	RACGAP1	Q9H0H5	632 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	CDCP1	Q9H5V8	836 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	EQTN	Q9NQ60	294 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	MAN2B2	Q9Y2E5	1009 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	FEZF1	A0PJY2	475 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	DVL2	O14641	736 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	SYN3	O14994	580 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	TNFRSF21	O75509	655 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	CCNYL3	P0C7X3	344 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	ATP1B2	P14415	290 aa	Predicted RBP	11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	ALAS2	P22557	587 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	APEX1	P27695	318 aa	Known RBP	11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	MAPK12	P53778	367 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	GPR85	P60893	370 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	CDC42	P60953	191 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	RUNX1T1	Q06455	604 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	IQCC	Q4KMZ1	466 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	ATAT1	Q5SQI0	421 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	GCNT6	Q5T4J0	391 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	AGAP6	Q5VW22	663 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	TMEM220	Q6QAJ8	160 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	ASB18	Q6ZVZ8	466 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	TMEM25	Q86YD3	366 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	SMAP2	Q8WU79	429 aa	Predicted RBP	11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	ASB11	Q8WXH4	323 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	KLK6	Q92876	244 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	PPCDC	Q96CD2	204 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	MSANTD3	Q96H12	275 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	AGAP4	Q96P64	663 aa		11.96	□□□□□ -0.49
DDR1-238	ENST00000446312	C2orf92	A0A1B0GVN3	265 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	FAM25E	A8MYX2	175 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	SCAMP2	O15127	329 aa	Known RBP	11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	AOC2	O75106	756 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	UROD	P06132	367 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	IL3	P08700	152 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	C1S	P09871	688 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	C8orf89	P0DMQ9	161 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	GPX2	P18283	190 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	IDS	P22304	550 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	SELENOW	P63302	87 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	VEPH1	Q14D04	833 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	IL20RB	Q6UXL0	311 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF600	Q6ZNG1	722 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	SERPINA11	Q86U17	422 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	MRPS31	Q92665	395 aa	Known RBP	11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	CASD1	Q96PB1	797 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	HDHD5	Q9BXW7	423 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	SUV39H2	Q9H5I1	410 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	PCDHGA2	Q9Y5H1	932 aa		11.96	□□□□□ -0.5
DDR1-238	ENST00000446312	VWA8	A3KMH1	1905 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312		A0A1W2PQL4	384 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	TMEM229A	B2RXF0	380 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	HR	O43593	1189 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	ACVR2A	P27037	513 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	SDC2	P34741	201 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	RAE1	P78406	368 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	MRPL58	Q14197	206 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	ARSI	Q5FYB1	569 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	PDZK1	Q5T2W1	519 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	PNCK	Q6P2M8	343 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CEACAM20	Q6UY09	585 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	COMMD6	Q7Z4G1	85 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	RAB43	Q86YS6	212 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	SIMC1	Q8NDZ2	872 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	OR2AP1	Q8NGE2	309 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CHAC2	Q8WUX2	184 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	TMED9	Q9BVK6	235 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CAPN10	Q9HC96	672 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	HCFC1R1	Q9NWW0	138 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CLN6	Q9NWW5	311 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CPNE7	Q9UBL6	633 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	KCNE1B	A0A087WTH5	132 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	MEIOC	A2RUB1	952 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CLDN24	A6NM45	220 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	KPNA3	O00505	521 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	HLA-F	P30511	346 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	SOX18	P35713	384 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	SRSF11	Q05519	484 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	GRIN2C	Q14957	1233 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF750	Q32MQ0	723 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CRTC2	Q53ET0	693 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	TECPR1	Q7Z6L1	1165 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	LACC1	Q8IV20	430 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	CPA6	Q8N4T0	437 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	USB1	Q9BQ65	265 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	VN1R3	Q9BXE9	311 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	KLF16	Q9BXK1	252 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	IFT22	Q9H7X7	185 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	RIMKLB	Q9ULI2	386 aa		11.95	□□□□□ -0.5
DDR1-238	ENST00000446312	FABP12	A6NFH5	140 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	PAH	P00439	452 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	JUP	P14923	745 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF8	P17098	575 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	LIM2	P55344	173 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	LRRC32	Q14392	662 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	SHE	Q5VZ18	495 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	FAHD1	Q6P587	224 aa		11.94	□□□□□ -0.5
DDR1-238	ENST00000446312	ZNF438	Q7Z4V0	828 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms