RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 LIMS1P48059 325 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 PYDC2Q56P42 97 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 PDZK1Q5T2W1 519 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 COMTD1Q86VU5 262 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 KRT73Q86Y46 540 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 RNF31Q96EP0 1072 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 YIPF4Q9BSR8 244 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 C3orf14Q9HBI5 128 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 NPAP1Q9NZP6 1156 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 COMMD3Q9UBI1 195 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 CLCA3PQ9Y6N3 262 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 OR6C70A6NIJ9 312 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 C5orf58C9J3I9 102 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 NPIPB8E9PQR5 432 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 ALPPL2P10696 532 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 CD79BP40259 229 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 ETV5P41161 510 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 ETV1P50549 477 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 XKP51811 444 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 EPHB3P54753 998 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 DSTNP60981 165 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 SCN1BQ07699 218 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 HYAL2Q12891 473 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 TMEM115Q12893 351 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-203ENST00000445889 ZNF770Q6IQ21 691 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-203ENST00000445889 CASP12Q6UXS9 341 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 GDPD4Q6W3E5 623 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 OR5D16Q8NGK9 328 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 FIBINQ8TAL6 211 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 KLHL6Q8WZ60 621 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 TMEM80Q96HE8 168 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 TMEM19Q96HH6 336 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 MAPKAP1Q9BPZ7 522 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 UCK2Q9BZX2 261 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 POLR2J3Q9H1A7 115 aaKnown RBP13.53□□□□□ -0.24
ERCC3-203ENST00000445889 MIXL1Q9H2W2 232 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 KCNK12Q9HB15 430 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 RC3H2Q9HBD1 1191 aaKnown RBP13.53□□□□□ -0.24
ERCC3-203ENST00000445889 MRPL17Q9NRX2 175 aaKnown RBP13.53□□□□□ -0.24
ERCC3-203ENST00000445889 TAAR2Q9P1P5 351 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 GRIP1Q9Y3R0 1128 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 CMAHPQ9Y471 501 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 INSL5Q9Y5Q6 135 aa13.53□□□□□ -0.24
ERCC3-203ENST00000445889 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-203ENST00000445889 ALPK3Q96L96 1907 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 K7ESM1 405 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 ZNF197O14709 1029 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 NCR1O76036 304 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 POP4O95707 220 aaKnown RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 TSPAN19P0C672 248 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 RHCEP18577 417 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 SDHBP21912 280 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 APEX1P27695 318 aaKnown RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 PTPN5P54829 565 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 GALK2Q01415 458 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 SP140Q13342 867 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 LARS2Q15031 903 aaKnown RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 B3GLCTQ6Y288 498 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 NOXA1Q86UR1 476 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 NLGN4YQ8NFZ3 816 aaPredicted RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 SLC7A13Q8TCU3 470 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 SPATA9Q9BWV2 254 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 BHLHE41Q9C0J9 482 aaPredicted RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 RACGAP1Q9H0H5 632 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 THSD1Q9NS62 852 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 CNOT2Q9NZN8 540 aaKnown RBP13.52□□□□□ -0.24
ERCC3-203ENST00000445889 TMCC3Q9ULS5 477 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 SSR3Q9UNL2 185 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 TRAPPC4Q9Y296 219 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 MAU2Q9Y6X3 613 aa13.52□□□□□ -0.24
ERCC3-203ENST00000445889 PIPSLA2A3N6 862 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 CENPBD1B2RD01 187 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 TPD52L2O43399 206 aaKnown RBP13.52□□□□□ -0.25
ERCC3-203ENST00000445889 CSF3P09919 207 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 MSL3P1P0C860 447 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 CHRNB1P11230 501 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
ERCC3-203ENST00000445889 DCST1Q5T197 706 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 TTC23LQ6PF05 361 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 TRMT11Q7Z4G4 463 aaKnown RBP13.52□□□□□ -0.25
ERCC3-203ENST00000445889 OXR1Q8N573 874 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 ATP6V1C2Q8NEY4 427 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.52□□□□□ -0.257e-8■■□□□ 12
ERCC3-203ENST00000445889 SLC7A6Q92536 515 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 GPA33Q99795 319 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 IRF2BPLQ9H1B7 796 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 BRF2Q9HAW0 419 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 SLC25A19Q9HC21 320 aa13.52□□□□□ -0.25
ERCC3-203ENST00000445889 TXNL4BQ9NX01 149 aaKnown RBP13.52□□□□□ -0.25
ERCC3-203ENST00000445889 LSM2Q9Y333 95 aaKnown RBP13.52□□□□□ -0.25
ERCC3-203ENST00000445889 PCM1Q15154 2024 aa13.51□□□□□ -0.25
ERCC3-203ENST00000445889 SCN8AQ9UQD0 1980 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms