RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TRIM46Q7Z4K8 759 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 KRT77Q7Z794 578 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 CLNKQ7Z7G1 428 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 ST13P4Q8IZP2 240 aaPredicted RBP11.47□□□□□ -0.57
LTBR-204ENST00000444814 RNF175Q8N4F7 328 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 C1orf52Q8N6N3 182 aaKnown RBP11.47□□□□□ -0.57
LTBR-204ENST00000444814 OR4K14Q8NGD5 310 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 OR5L2Q8NGL0 311 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 CSF3RQ99062 836 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 VIPAS39Q9H9C1 493 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 NECTIN3Q9NQS3 549 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 STMN3Q9NZ72 180 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 ZNF225Q9UK10 706 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 B3GNT3Q9Y2A9 372 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 TIMM22Q9Y584 194 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 ZNF780BQ9Y6R6 833 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 FER1L5A0AVI2 2057 aa11.47□□□□□ -0.57
LTBR-204ENST00000444814 IGHV3-20A0A0C4DH32 117 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 A8MUI8 341 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 SLC28A2O43868 658 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 PCDH7O60245 1069 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 DNAJB6O75190 326 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 EEDO75530 441 aaKnown RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 ZFAND5O76080 213 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 ETHE1O95571 254 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 NAT1P18440 290 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 GALNSP34059 522 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 STT3AP46977 705 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 TAGLNQ01995 201 aaKnown RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 HSP90B2PQ58FF3 399 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 TNFAIP8L3Q5GJ75 292 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 ARL13AQ5H913 290 aaPredicted RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 NDUFAF5Q5TEU4 345 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 B3GNTL1Q67FW5 361 aaPredicted RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 IGFL2Q6UWQ7 119 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 SIRT6Q8N6T7 355 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 DNAJB14Q8TBM8 379 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 CHTF18Q8WVB6 975 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 SORBS1Q9BX66 1292 aaKnown RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 ACPTQ9BZG2 426 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 SEMA4CQ9C0C4 833 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 TMBIM4Q9HC24 238 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 FARSBQ9NSD9 589 aaKnown RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 SIRT5Q9NXA8 310 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.46□□□□□ -0.57
LTBR-204ENST00000444814 TMED5Q9Y3A6 229 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 TRAF6Q9Y4K3 522 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 ATG4BQ9Y4P1 393 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 ASB4Q9Y574 426 aa11.46□□□□□ -0.57
LTBR-204ENST00000444814 TRAV17A0A0B4J275 112 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 TTLL8A6PVC2 850 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 A8MUA0 341 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 C17orf105B2RV13 164 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 TMPRSS11DO60235 418 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 AIFM1O95831 613 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 SLC35E2P0CK97 266 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 ITGAMP11215 1152 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 TIA1P31483 386 aaKnown RBP eCLIP11.45□□□□□ -0.58
LTBR-204ENST00000444814 HNRNPH2P55795 449 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 FOLH1Q04609 750 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 SH2D4BQ5SQS7 431 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 ATG16L1Q676U5 607 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 GALNT18Q6P9A2 607 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 LINC00696Q6ZRV3 163 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 RPS19BP1Q86WX3 136 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 DDIASQ8IXT1 998 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 ANKRD42Q8N9B4 389 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 OR8K3Q8NH51 312 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 RAB3IL1Q8TBN0 382 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 HAS2Q92819 552 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 PPP3R2Q96LZ3 170 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 UTP23Q9BRU9 249 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 ZNF717Q9BY31 904 aaPredicted RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.45□□□□□ -0.58
LTBR-204ENST00000444814 C12orf65Q9H3J6 166 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 RALYQ9UKM9 306 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 PPIEQ9UNP9 301 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 PCDHA9Q9Y5H5 950 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 A0A1B0GTL3 188 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 A0A1W2PR48 441 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 UBFD1O14562 309 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 SUV39H1O43463 412 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 LDB3O75112 727 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 COQ9O75208 318 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 SEC22BO75396 215 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 ANXA4P09525 319 aaPredicted RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 PCSK2P16519 638 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 CSNK2A2P19784 350 aaPredicted RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 TPP2P29144 1249 aaPredicted RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 SOX11P35716 441 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 ETV4P43268 484 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 MAGOHP61326 146 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 IGLV3-21P80748 117 aaPredicted RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 BTKQ06187 659 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 ZNF763Q0D2J5 394 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 Q0VFX4 171 aa11.45□□□□□ -0.58
LTBR-204ENST00000444814 TBL3Q12788 808 aaKnown RBP11.45□□□□□ -0.58
LTBR-204ENST00000444814 MAD2L1Q13257 205 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms