RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 GLOD5A6NK44 160 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 A8MT66 165 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 FOXO6A8MYZ6 492 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 FCHO1O14526 889 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 RIPK2O43353 540 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 PROM1O43490 865 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SLC19A2O60779 497 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 CLPSP04118 112 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 RPS17P08708 135 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SNRPAP09012 282 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 RBP1P09455 135 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 MYBL2P10244 700 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 GRNP28799 593 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SERPINB1P30740 379 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 PTGER1P34995 402 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SOX3P41225 446 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 CDH13P55290 713 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 FOLH1Q04609 750 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 STX4Q12846 297 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 TSNAXIP1Q2TAA8 658 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 LETMD1Q6P1Q0 360 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 C9orf40Q8IXQ3 194 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 TMEM132CQ8N3T6 1108 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 ZCCHC7Q8N3Z6 543 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 MORN4Q8NDC4 146 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SRFBP1Q8NEF9 429 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 RGMAQ96B86 450 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 MTBPQ96DY7 904 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SCYL1Q96KG9 808 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 RASL10BQ96S79 203 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 ROGDIQ9GZN7 287 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 RPF2Q9H7B2 306 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 SEMA4BQ9NPR2 832 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 FARSBQ9NSD9 589 aaKnown RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 TEX10Q9NXF1 929 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-203ENST00000444440 MYOTQ9UBF9 498 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 TMCO1Q9UM00 188 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 PCDHGA11Q9Y5H2 935 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 CLCA3PQ9Y6N3 262 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 AKAP9Q99996 3911 aa10.09□□□□□ -0.79
SF3A1-203ENST00000444440 PKDREJQ9NTG1 2253 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 G3V3Y1 287 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 STX16-NPEPL1H3BU86 382 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 CCL21O00585 134 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 STX16O14662 325 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ASNA1O43681 348 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 PEX1O43933 1283 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF500O60304 480 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 UGDHO60701 494 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ZFAND5O76080 213 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 CLDN9O95484 217 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 NADKO95544 446 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 AIFM1O95831 613 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 IGKV3-11P04433 115 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 RAP1GDS1P52306 607 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 RNF4P78317 190 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF750Q32MQ0 723 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 TCHHL1Q5QJ38 904 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 IL20RBQ6UXL0 311 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 HSDL2Q6YN16 418 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 C3P1Q6ZMU1 363 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 Q6ZPB1 254 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 GPR180Q86V85 440 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 TMEM156Q8N614 296 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 HORMAD2Q8N7B1 307 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 OR4F6Q8NGB9 312 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 OR14A16Q8NHC5 309 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF483Q8TF39 744 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 MZB1Q8WU39 189 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 DAZLQ92904 295 aaKnown RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 NTMT1Q9BV86 223 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 DDX31Q9H8H2 851 aaKnown RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 TMEM216Q9P0N5 145 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 FETUBQ9UGM5 382 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 ADGRE2Q9UHX3 823 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 YARS2Q9Y2Z4 477 aaKnown RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 TNPO3Q9Y5L0 923 aaKnown RBP10.08□□□□□ -0.8
SF3A1-203ENST00000444440 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
SF3A1-203ENST00000444440 APCP25054 2843 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 MED12Q93074 2177 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 IQANK1A0A1B0GTG1 560 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 FOXE1O00358 373 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 ADAM10O14672 748 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 PGRMC2O15173 223 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 HS6ST1O60243 411 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 FAM58BPP0C7Q3 252 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 PRF1P14222 555 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF24P17028 368 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 TNNI3P19429 210 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 PTX3P26022 381 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 STT3AP46977 705 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 SSR4P51571 173 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 CCNG1P51959 295 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 PER3P56645 1201 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 CUL3Q13618 768 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 SERTAD2Q14140 314 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 RCN2Q14257 317 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 SLC29A2Q14542 456 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms