RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 AGPAT4Q9NRZ5 378 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 ADAM29Q9UKF5 820 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 RAB21Q9UL25 225 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 NAV2Q8IVL1 2488 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 WASHC1A8K0Z3 465 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 C17orf105B2RV13 164 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 NR2F6P10588 404 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 CPA3P15088 417 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 HMOX2P30519 316 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 NAGLUP54802 743 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 DNAJB13P59910 316 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 FOLH1Q04609 750 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 NR6A1Q15406 480 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 PAGE2Q7Z2X7 111 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 ARMC10Q8N2F6 343 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 MORN4Q8NDC4 146 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 MDS2Q8NDY4 140 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 THAP3Q8WTV1 239 aaPredicted RBP22.03■■□□□ 1.12
VARS-217ENST00000440048 MKS1Q9NXB0 559 aa22.03■■□□□ 1.12
VARS-217ENST00000440048 HIVEP3Q5T1R4 2406 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 CLEC18AA5D8T8 446 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 GLOD5A6NK44 160 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 ESRRBO95718 433 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 AIFM1O95831 613 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 ENO1P06733 434 aaKnown RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 HSD3B1P14060 373 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 HSD3B2P26439 372 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 STT3AP46977 705 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 OC90Q02509 493 aaPredicted RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 GALNT1Q10472 559 aaPredicted RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 TBL3Q12788 808 aaKnown RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 MRPL49Q13405 166 aaKnown RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 OR1C1Q15619 314 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 ZNF766Q5HY98 468 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 CCNYL2Q5T2Q4 361 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 ZNF468Q5VIY5 522 aaPredicted RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 CLEC18BQ6UXF7 455 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 COMMD6Q7Z4G1 85 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 CLEC18CQ8NCF0 446 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 AGAP11Q8TF27 550 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 UCN3Q969E3 161 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 APOPT1Q96IL0 206 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 DGAT2Q96PD7 388 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 TAAR6Q96RI8 345 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 WDR41Q9HAD4 459 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 OXSMQ9NWU1 459 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 NMRK1Q9NWW6 199 aa22.02■■□□□ 1.12
VARS-217ENST00000440048 TEX10Q9NXF1 929 aaPredicted RBP22.02■■□□□ 1.12
VARS-217ENST00000440048 MAST4O15021 2626 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 ARHGAP10A1A4S6 786 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 CDK2AP1O14519 115 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 UBFD1O14562 309 aaKnown RBP22.01■■□□□ 1.11
VARS-217ENST00000440048 PRKNO60260 465 aaPredicted RBP22.01■■□□□ 1.11
VARS-217ENST00000440048 ULK1O75385 1050 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 ZFAND5O76080 213 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 GPR75O95800 540 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 DDAH2O95865 285 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 HTR6P50406 440 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 NAA20P61599 178 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 BIKQ13323 160 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 INAQ16352 499 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 SPINK14Q6IE38 97 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 FAM180AQ6UWF9 173 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 FRMD7Q6ZUT3 714 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 SRRM1Q8IYB3 904 aaKnown RBP22.01■■□□□ 1.11
VARS-217ENST00000440048 FAM26EQ8N5C1 309 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 ZNF321PQ8N8H1 164 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 BANPQ8N9N5 519 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 SLC2A12Q8TD20 617 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 FAR1Q8WVX9 515 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 KCNA7Q96RP8 456 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 TMEM109Q9BVC6 243 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 OR8D2Q9GZM6 311 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 MID1IP1Q9NPA3 183 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 VPS29Q9UBQ0 182 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 PLLPQ9Y342 182 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 TIMM22Q9Y584 194 aa22.01■■□□□ 1.11
VARS-217ENST00000440048 ZGRF1Q86YA3 2104 aa22■■□□□ 1.11
VARS-217ENST00000440048 FCHO1O14526 889 aa22■■□□□ 1.11
VARS-217ENST00000440048 PGRMC2O15173 223 aa22■■□□□ 1.11
VARS-217ENST00000440048 CBX6O95503 412 aa22■■□□□ 1.11
VARS-217ENST00000440048 COX7A2P14406 83 aa22■■□□□ 1.11
VARS-217ENST00000440048 CHN1P15882 459 aa22■■□□□ 1.11
VARS-217ENST00000440048 ALOX15P16050 662 aaPredicted RBP22■■□□□ 1.11
VARS-217ENST00000440048 CSTF3Q12996 717 aaKnown RBP22■■□□□ 1.11
VARS-217ENST00000440048 CFAP157Q5JU67 520 aa22■■□□□ 1.11
VARS-217ENST00000440048 DGAT2L6Q6ZPD8 337 aa22■■□□□ 1.11
VARS-217ENST00000440048 BCORP1Q8N888 145 aa22■■□□□ 1.11
VARS-217ENST00000440048 PPWD1Q96BP3 646 aaKnown RBP22■■□□□ 1.11
VARS-217ENST00000440048 RBM18Q96H35 190 aaKnown RBP22■■□□□ 1.11
VARS-217ENST00000440048 IQCGQ9H095 443 aaKnown RBP22■■□□□ 1.11
VARS-217ENST00000440048 LRFN1Q9P244 771 aa22■■□□□ 1.11
VARS-217ENST00000440048 MID2Q9UJV3 735 aa22■■□□□ 1.11
VARS-217ENST00000440048 PCDHGB6Q9Y5F9 930 aa22■■□□□ 1.11
VARS-217ENST00000440048 NEURL1O76050 574 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 TRHRP34981 398 aaPredicted RBP21.99■■□□□ 1.11
VARS-217ENST00000440048 MAPK12P53778 367 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 PLIN5Q00G26 463 aa21.99■■□□□ 1.11
VARS-217ENST00000440048 SRSF1Q07955 248 aaKnown RBP eCLIP21.99■■□□□ 1.11
VARS-217ENST00000440048 NDUFAF5Q5TEU4 345 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms