RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 BBS7Q8IWZ6 715 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CREB3L4Q8TEY5 395 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 GTPBP3Q969Y2 492 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 SLC25A46Q96AG3 418 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 KXD1Q9BQD3 176 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SPON2Q9BUD6 331 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 TRAF4Q9BUZ4 470 aaPredicted RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.17□□□□□ -1.1
HPS4-206ENST00000439453 NUP50Q9UKX7 468 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ITM2BQ9Y287 266 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 PCDHB11Q9Y5F2 797 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 GREM1O60565 184 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SLC25A14O95258 325 aaPredicted RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 HLA-EP13747 358 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 COX7A2P14406 83 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 EPORP19235 508 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 PRPH2P23942 346 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 VIPR2P41587 438 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SELENOWP63302 87 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 HSPA14Q0VDF9 509 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 TAF10Q12962 218 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 HNRNPA0Q13151 305 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 NOXRED1Q6NXP6 359 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 METTL2BQ6P1Q9 378 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 SLC34A3Q8N130 599 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CFAP52Q8N1V2 620 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 FBXL6Q8N531 539 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 OR4M2Q8NGB6 313 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 ELSPBP1Q96BH3 223 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 SPATA9Q9BWV2 254 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 CHST8Q9H2A9 424 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 TRIM45Q9H8W5 580 aaPredicted RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 GLTPQ9NZD2 209 aa8.17□□□□□ -1.1
HPS4-206ENST00000439453 EIF3KQ9UBQ5 218 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 NDRG2Q9UN36 371 aaKnown RBP8.17□□□□□ -1.1
HPS4-206ENST00000439453 UPK3BL1B0FP48 263 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 UPK3BL2E5RIL1 263 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZNF197O14709 1029 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 GCM2O75603 506 aaPredicted RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 TSPAN9O75954 239 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 OPN1SWP03999 348 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 CLEC2LP0C7M8 214 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 AMD1P17707 334 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 CR2P20023 1033 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 CNR2P34972 360 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 OR1E2P47887 323 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZXDAP98168 799 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 SYT12Q8IV01 421 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 WBP2Q969T9 261 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 KIAA1143Q96AT1 154 aaPredicted RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 CCDC120Q96HB5 630 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MAPKAP1Q9BPZ7 522 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 FAM120CQ9NX05 1096 aaKnown RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 NDUFB11Q9NX14 153 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 SH3BP4Q9P0V3 963 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PLEKHB1Q9UF11 243 aaPredicted RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 YY2O15391 372 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PROM1O43490 865 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 SCO1O75880 301 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 AP2A2O94973 939 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 LGI1O95970 557 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZNF7P17097 686 aaPredicted RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 PCGF2P35227 344 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MAB21L1Q13394 359 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 IFI44LQ53G44 452 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 DDI2Q5TDH0 399 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 CMTM8Q8IZV2 173 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 FAM129BQ96TA1 746 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ADGRE3Q9BY15 652 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 RACGAP1Q9H0H5 632 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 HCN4Q9Y3Q4 1203 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PRSS21Q9Y6M0 314 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 CLCA3PQ9Y6N3 262 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 AP1M2Q9Y6Q5 423 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 KCNE1BA0A087WTH5 132 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 TRAV19A0A0A6YYK7 116 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZAR1LA6NP61 321 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 A8MVJ9 347 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PCDH17O14917 1159 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PLD2O14939 933 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MYL12BO14950 172 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PDPK1O15530 556 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 TPST2O60704 377 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ENTPD6O75354 484 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 FGF19O95750 216 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 IL1AP01583 271 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PCSK2P16519 638 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MYL12AP19105 171 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 PTGS2P35354 604 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 MAN2A2P49641 1150 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 TAGLNQ01995 201 aaKnown RBP8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZNF77Q15935 545 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 HSDL2Q6YN16 418 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 SERPINA9Q86WD7 417 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZNF687Q8N1G0 1237 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ZBTB2Q8N680 514 aa8.16□□□□□ -1.1
HPS4-206ENST00000439453 ESX1Q8N693 406 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms