RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GLOD5A6NK44 160 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 ARHGEF33A8MVX0 844 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 C5orf58C9J3I9 102 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 CCNB2O95067 398 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 NTN1O95631 604 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC2A2P11168 524 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 CCL5P13501 91 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 CDC42P60953 191 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZNF45Q02386 682 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 RPA4Q13156 261 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLBPQ14493 270 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 BCL2L15Q5TBC7 163 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 FAM205BPQ63HN1 556 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 SIGIRRQ6IA17 410 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 TTC23LQ6PF05 361 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 WDR53Q7Z5U6 358 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 TSPYL5Q86VY4 417 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 CHPFQ8IZ52 775 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 TM9SF3Q9HD45 589 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 RIMKLBQ9ULI2 386 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 DYRK1BQ9Y463 629 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 MYO16Q9Y6X6 1858 aa9.49□□□□□ -0.89
CDC42SE1-202ENST00000439374 A0A0G2JMP0 313 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CD8B2A6NJW9 211 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CENPBD1B2RD01 187 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ALX3O95076 343 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CCNDBP1O95273 360 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 C6orf47O95873 294 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CD8BP10966 210 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 RYKP34925 604 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 RFX2P48378 723 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 FCHO2Q0JRZ9 810 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CASP12Q6UXS9 341 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC39A11Q8N1S5 342 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ISG20Q96AZ6 181 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 IGFLR1Q9H665 355 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC23A1Q9UHI7 598 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 RPS6KA6Q9UK32 745 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SSR3Q9UNL2 185 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 PPIEQ9UNP9 301 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ALG5Q9Y673 324 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZSWIM8A7E2V4 1837 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 MAP1BP46821 2468 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 WDR87Q6ZQQ6 2873 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CHURC1-FNTBB4DL54 471 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 FZD6O60353 706 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 HPGDSO60760 199 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRAMEF4O60810 478 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SERPINI2O75830 405 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ABLIM3O94929 683 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ETHE1O95571 254 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ADH1AP07327 375 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 DRD5P21918 477 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 AOAHP28039 575 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 MAPK8P45983 427 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CTBP2P56545 445 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 TMEM115Q12893 351 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 HSPB3Q12988 150 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 RAB33AQ14088 237 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 PTGES3Q15185 160 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 IQCCQ4KMZ1 466 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 TCEAL5Q5H9L2 206 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRAMEF9Q5VWM5 478 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 KDM4DQ6B0I6 523 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 KIAA1161Q6NSJ0 714 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 RBM45Q8IUH3 476 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 HUS1BQ8NHY5 278 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC7A6Q92536 515 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 TRIM63Q969Q1 353 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 EXOSC8Q96B26 276 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 TMCO6Q96DC7 493 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 COL21A1Q96P44 957 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CPPED1Q9BRF8 314 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 GORASP2Q9H8Y8 452 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 IL21Q9HBE4 155 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CLN6Q9NWW5 311 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CRNNQ9UBG3 495 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CFL2Q9Y281 166 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 K7ESM1 405 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC16A6O15403 523 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 HRO43593 1189 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 GADD45GO95257 159 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 CDK1P06493 297 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRR35P0CG20 571 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SYN1P17600 705 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 RFX3P48380 749 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ERVFC1P60507 584 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SUZ12Q15022 739 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 BRAT1Q6PJG6 821 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC30A8Q8IWU4 369 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 Q8N402 240 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 ASB15Q8WXK1 588 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC22A4Q9H015 551 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 OR51B4Q9Y5P0 310 aa9.48□□□□□ -0.89
CDC42SE1-202ENST00000439374 YY2O15391 372 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 FRS3O43559 492 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ERAL1O75616 437 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms