RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 C1orf226A1L170 272 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 OR2AG2A6NM03 316 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 M0QZQ0 153 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SIGLEC5O15389 551 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SEPT4O43236 478 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 LALBAP00709 142 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 IGHA2P01877 340 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 PRKAR1AP10644 381 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF30P17039 623 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MAPK1P28482 360 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 HNF1BP35680 557 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SRSF11Q05519 484 aaKnown RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SIGLEC14Q08ET2 396 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 VEZF1Q14119 521 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MBTPS1Q14703 1052 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SUZ12Q15022 739 aaKnown RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 C2orf73Q8N5S3 287 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 GPR26Q8NDV2 337 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 WFDC5Q8TCV5 224 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 BTN2A2Q8WVV5 523 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 LRR1Q96L50 414 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 CHST8Q9H2A9 424 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SLAMF7Q9NQ25 335 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 POM121CA8CG34 1229 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SCAMP2O15127 329 aaKnown RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 KDELR3O43731 214 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ACSL4O60488 711 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 OR12D1P0DN82 309 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ICAM2P13598 275 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 RPL17P18621 184 aaKnown RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ACRV1P26436 265 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF81P51508 661 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 CDK6Q00534 326 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 PIN1Q13526 163 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 C1DQ13901 141 aaKnown RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 PUM1Q14671 1186 aaKnown RBP eCLIP12.75□□□□□ -0.375e-6■■■□□ 17
ACTN1-204ENST00000438964 CRB2Q5IJ48 1285 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 CREB3L2Q70SY1 520 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ZBTB44Q8NCP5 570 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 HUS1BQ8NHY5 278 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 KCTD7Q96MP8 289 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MND1Q9BWT6 205 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SAP130Q9H0E3 1048 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 NUDT15Q9NV35 164 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 ASIC5Q9NY37 505 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 IQCMA0A1B0GVH7 501 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 TMEM202A6NGA9 273 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 H3BNC9 293 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 GSTM5P46439 218 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 XKP51811 444 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MVDP53602 400 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 VSX2P58304 361 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-204ENST00000438964 NAE1Q13564 534 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 PRSS53Q2L4Q9 553 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 USP45Q70EL2 814 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 NANOGP1Q8N7R0 232 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MYO19Q96H55 970 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MVB12BQ9H7P6 319 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SLC28A3Q9HAS3 691 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 SGK2Q9HBY8 427 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 FNIP2Q9P278 1114 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 KLHL21Q9UJP4 597 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 MAPRE3Q9UPY8 281 aa12.75□□□□□ -0.37
ACTN1-204ENST00000438964 TGFB1P01137 390 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 HLA-DMAP28067 261 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 AP2S1P53680 142 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 EPHA5P54756 1037 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 PER3P56645 1201 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 RAE1P78406 368 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 MLLT1Q03111 559 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 CRYZQ08257 329 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 GCNT6Q5T4J0 391 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 ZNF767PQ75MW2 155 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 LAPTM4BQ86VI4 370 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 CSGALNACT1Q8TDX6 532 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 SLC9A6Q92581 669 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 POLR2J3Q9H1A7 115 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 NKIRAS2Q9NYR9 191 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 U3KQ87 197 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 HELZP42694 1942 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 RECKO95980 971 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 IDSP22304 550 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 CORO1AP31146 461 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 XCR1P46094 333 aa12.74□□□□□ -0.37
ACTN1-204ENST00000438964 RPS13P62277 151 aaKnown RBP12.74□□□□□ -0.37
ACTN1-204ENST00000438964 B4GALNT1Q00973 533 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms