RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LIX1Q8N485 282 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 FBXO15Q8NCQ5 510 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 PYROXD1Q8WU10 500 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 RASL10BQ96S79 203 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 RBM24Q9BX46 236 aaKnown RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 GRIP2Q9C0E4 1043 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 NECTIN3Q9NQS3 549 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 ZFATQ9P243 1243 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 SLC2A6Q9UGQ3 507 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF223Q9UK11 482 aaPredicted RBP10.26□□□□□ -0.77
CSTF3-203ENST00000438862 TCAF1Q9Y4C2 921 aa10.26□□□□□ -0.77
CSTF3-203ENST00000438862 PSMD12O00232 456 aaPredicted RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 CD3EAPO15446 510 aaKnown RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 LCMT2O60294 686 aaKnown RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 AVILO75366 819 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 ERLIN1O75477 346 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 NDUFS3O75489 264 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 SOX30O94993 753 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 THBS1P07996 1170 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 FAM157CP0CG43 387 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 PAMP19021 973 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 MGAT1P26572 445 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 MAGEA4P43358 317 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 ADARP55265 1226 aaKnown RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 OLR1P78380 273 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 TBL3Q12788 808 aaKnown RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 ILF2Q12905 390 aaKnown RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 TNK1Q13470 666 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 PWP1Q13610 501 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 KLHL38Q2WGJ6 581 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 BBS9Q3SYG4 887 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 DEFB134Q4QY38 66 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 OPN5Q6U736 354 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 LMNTD2Q8IXW0 634 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 MPP5Q8N3R9 675 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF740Q8NDX6 193 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 GABPB2Q8TAK5 448 aaPredicted RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 CAVIN3Q969G5 261 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 NCLNQ969V3 563 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 SCYL1Q96KG9 808 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 FUT8Q9BYC5 575 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 AMBRA1Q9C0C7 1298 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 PCBD2Q9H0N5 130 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 UBTD1Q9HAC8 227 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 TREX1Q9NSU2 369 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 ATG4BQ9Y4P1 393 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 V9GYY5 206 aaPredicted RBP10.25□□□□□ -0.77
CSTF3-203ENST00000438862 KIAA1549Q9HCM3 1950 aa10.25□□□□□ -0.77
CSTF3-203ENST00000438862 MBD3L3A6NE82 208 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CD8B2A6NJW9 211 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 H3BMM5 538 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 WWP2O00308 870 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CD5LO43866 347 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 PRKNO60260 465 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 TMCC2O75069 709 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ERN1O75460 977 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 RNH1P13489 461 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ELK3P41970 407 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 AGFG1P52594 562 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 WNT3P56703 355 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CAPRIN1Q14444 709 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 PHKG1Q16816 387 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 KCTD19Q17RG1 926 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 KRTAP24-1Q3LI83 254 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 SPANXN3Q5MJ09 141 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 STEAP4Q687X5 459 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CASC4Q6P4E1 433 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 PLEKHM3Q6ZWE6 761 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 PALM2Q8IXS6 379 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ZBED8Q8IZ13 594 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 AGGF1Q8N302 714 aaeCLIP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 MREGQ8N565 214 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 MFSD9Q8NBP5 474 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 FBXO36Q8NEA4 188 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 MBD3L2Q8NHZ7 208 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 AENQ8WTP8 325 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF778Q96MU6 729 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 WDR83Q9BRX9 315 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 TXLNGYQ9BZA5 131 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 LIN28AQ9H9Z2 209 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CALHM2Q9HA72 323 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ZFP64Q9NPA5 681 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 SAYSD1Q9NPB0 183 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 SEMA4BQ9NPR2 832 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CCDC177Q9NQR7 707 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 CHRAC1Q9NRG0 131 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 YAE1D1Q9NRH1 226 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 PNO1Q9NRX1 252 aaKnown RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 SYBUQ9NX95 663 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 GALNT8Q9NY28 637 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF226Q9NYT6 803 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 BOKQ9UMX3 212 aaPredicted RBP10.24□□□□□ -0.77
CSTF3-203ENST00000438862 MMACHCQ9Y4U1 282 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 MAD1L1Q9Y6D9 718 aa10.24□□□□□ -0.77
CSTF3-203ENST00000438862 ABCA1O95477 2261 aa10.23□□□□□ -0.77
CSTF3-203ENST00000438862 ZCWPW2A0A1B0GU75 182 aa10.23□□□□□ -0.77
CSTF3-203ENST00000438862 KDM4EB2RXH2 506 aaPredicted RBP10.23□□□□□ -0.77
CSTF3-203ENST00000438862 ZBTB14O43829 449 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms