RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CDRT15L2A8MXV6 281 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 SPECC1L-ADORA2AF8WAN1 911 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 C19orf84I3L1E1 186 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 K7EM74 188 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CSO75390 466 aaKnown RBP2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ASNSP08243 561 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 HOXD4P09016 255 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 GP9P14770 177 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 MMP9P14780 707 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CDH3P22223 829 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 RABIFP47224 123 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ZFP36L2P47974 494 aaKnown RBP2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 SUOXP51687 545 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CDH8P55286 799 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 NTHL1P78549 312 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 GCNT1Q02742 428 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 COG2Q14746 738 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 NR1D2Q14995 579 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 EFTUD2Q15029 972 aaKnown RBP eCLIP2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 HERC3Q15034 1050 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ELFN2Q5R3F8 820 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 LCN1P1Q5VSP4 162 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 LIPNQ5VXI9 398 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 FIGLAQ6QHK4 219 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 FRRS1Q6ZNA5 592 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 COPS6Q7L5N1 327 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 G2E3Q7L622 706 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 KCNMB4Q86W47 210 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CATSPERDQ86XM0 798 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 KRTAP11-1Q8IUC1 163 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CEP57L1Q8IYX8 460 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 METTL4Q8N3J2 472 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 PCYOX1LQ8NBM8 494 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 OR11H4Q8NGC9 324 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 C11orf45Q8TAV5 145 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CHPT1Q8WUD6 406 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CCDC107Q8WV48 283 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ING5Q8WYH8 240 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 TOMM40LQ969M1 308 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ELSPBP1Q96BH3 223 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CYYR1Q96J86 154 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 NKX3-1Q99801 234 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ANKRD2Q9GZV1 360 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 UNC45AQ9H3U1 944 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 LIME1Q9H400 295 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 C8orf33Q9H7E9 229 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 TRPV5Q9NQA5 729 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 HOXC10Q9NYD6 342 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 CTSZQ9UBR2 303 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ZNF69Q9UC07 566 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 GLS2Q9UI32 602 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 NEBP20929 6669 aa2.23□□□□□ -2.05
HMGB1P18-201ENST00000438801 ZNF263O14978 683 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 ENTPD3O75355 529 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 MED24O75448 989 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CREG1O75629 220 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 DDHD2O94830 711 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 TNFSF15O95150 251 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 AGR2O95994 175 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 MELTFP08582 738 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 BCL3P20749 454 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 GABRA5P31644 462 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 P2RY2P41231 377 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CDK3Q00526 305 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CNTN2Q02246 1040 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CES4AQ5XG92 561 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CCDC70Q6NSX1 233 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 TMED8Q6PL24 325 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 TMPRSS11FQ6ZWK6 438 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 IKBIPQ70UQ0 350 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CHST9Q7L1S5 443 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CAMKMTQ7Z624 323 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 RALGPS2Q86X27 583 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 Q8N7P7 452 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 ACBD4Q8NC06 268 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 GMCL1P1Q8NEA9 526 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 IL17REQ8NFR9 667 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 RPLP0P6Q8NHW5 317 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 APOBEC4Q8WW27 367 aaKnown RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 ITLN2Q8WWU7 325 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CNOT6LQ96LI5 555 aaKnown RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 C12orf42Q96LP6 360 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CATSPER2Q96P56 530 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 TBX15Q96SF7 602 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 ZNF577Q9BSK1 485 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 MIS12Q9H081 205 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 NT5C3AQ9H0P0 336 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 FAM49AQ9H0Q0 323 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 ZBP1Q9H171 429 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 KCNK15Q9H427 330 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 B3GAT2Q9NPZ5 323 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 FAM207AQ9NSI2 230 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 IRAK4Q9NWZ3 460 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 CLIP2Q9UDT6 1046 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 PLXND1Q9Y4D7 1925 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 DOCK10Q96BY6 2186 aa2.22□□□□□ -2.05
HMGB1P18-201ENST00000438801 SCN8AQ9UQD0 1980 aa2.21□□□□□ -2.05
HMGB1P18-201ENST00000438801 FER1L5A0AVI2 2057 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 UNC13CQ8NB66 2214 aa2.21□□□□□ -2.06
HMGB1P18-201ENST00000438801 LRRC72A6NJI9 287 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms