RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 OR52E1Q8NGJ3 308 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 UBTD2Q8WUN7 234 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 EID2BQ96D98 161 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TOE1Q96GM8 510 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 GAL3ST4Q96RP7 486 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 DPYSL5Q9BPU6 564 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 SPRTNQ9H040 489 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TM7SF3Q9NS93 570 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 NKIRAS2Q9NYR9 191 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF624Q9P2J8 865 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 AASSQ9UDR5 926 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 USP22Q9UPT9 525 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 NUP214P35658 2090 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 C9P02748 559 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 FUCA1P04066 466 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 BIKQ13323 160 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM35AQ53FP2 167 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 CYHR1Q6ZMK1 362 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 RNF44Q7L0R7 432 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 PIWIL3Q7Z3Z3 882 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 ALDH16A1Q8IZ83 802 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 L3MBTL4Q8NA19 623 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TEX37Q96LM6 180 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 MACROD1Q9BQ69 325 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 RBCK1Q9BYM8 510 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM184CQ9NVA4 438 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 GTF2A1LQ9UNN4 478 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 BTN3A3O00478 584 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 RABIFP47224 123 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TUBA4AP68366 448 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM52BQ4KMG9 183 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 PYDC2Q56P42 97 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR4C11Q6IEV9 310 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 FAM92BQ6ZTR7 304 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 C6orf120Q7Z4R8 191 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 VTCN1Q7Z7D3 282 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR4K14Q8NGD5 310 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR56A1Q8NGH5 318 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 WDR48Q8TAF3 677 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TBC1D15Q8TC07 691 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 SGCDQ92629 289 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TANKQ92844 425 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 FGF14Q92915 247 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 ELSPBP1Q96BH3 223 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 EPHX3Q9H6B9 360 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 TM9SF3Q9HD45 589 aa11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 CUEDC1Q9NWM3 386 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC9-202ENST00000438773 A0A1B0GTL3 188 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 PRSS38A1L453 326 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM150CB9EJG8 249 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 IGHA2P01877 340 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 ALOX5P09917 674 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 CD97P48960 835 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 CSRP3P50461 194 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 XKP51811 444 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 METAP1P53582 386 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 HHEXQ03014 270 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 RBBP4Q09028 425 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 KLHL12Q53G59 568 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 MSANTD1Q6ZTZ1 278 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLC22A16Q86VW1 577 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 INSM2Q96T92 566 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 BEX2Q9BXY8 128 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 CLMPQ9H6B4 373 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 C11orf16Q9NQ32 467 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 RHCGQ9UBD6 479 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 GRXCR2A6NFK2 248 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 GABRR3A8MPY1 467 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 COQ9O75208 318 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR6A2O95222 327 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 H1F0P07305 194 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 OR12D1P0DN82 309 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 POLR2IP36954 125 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 RPS3AP61247 264 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 CSNK2BP67870 215 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 KCNAB2Q13303 367 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZNF311Q5JNZ3 666 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 WDR45BQ5MNZ6 344 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 NDUFAF5Q5TEU4 345 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 FIGLAQ6QHK4 219 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 SLCO4C1Q6ZQN7 724 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 TRIM46Q7Z4K8 759 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 ZZZ3Q8IYH5 903 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 GJD3Q8N144 294 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 TIMM29Q9BSF4 260 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 GIN1Q9NXP7 522 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 YBX2Q9Y2T7 364 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 TMEM265A0A087WTH1 108 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 FAM47E-STBD1D6RA91 191 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 H0YIV9 168 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 GFRA2O00451 464 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 AIREO43918 545 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 SEMA3DO95025 777 aa11.03□□□□□ -0.64
TRAPPC9-202ENST00000438773 HIST1H2ABP04908 130 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms