RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MFN2O95140 757 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 FUCA1P04066 466 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 TEAD1P28347 426 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 UGT2B10P36537 528 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 CTSKP43235 329 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 PSMD7P51665 324 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 LIM2P55344 173 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 DMPKQ09013 629 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 PTGES3Q15185 160 aaKnown RBP17.65■□□□□ 0.42
CLK1-205ENST00000434813 SYT16Q17RD7 645 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 SPDYE7PQ495Y7 208 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 FBXO43Q4G163 708 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 KLHL17Q6TDP4 642 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 C6orf120Q7Z4R8 191 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 PLD3Q8IV08 490 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 RAB42Q8N4Z0 105 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 LINC01555Q8NAE3 123 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 GPR32P1Q8NGA4 272 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 WDR26Q9H7D7 661 aa17.65■□□□□ 0.42
CLK1-205ENST00000434813 ACSS1Q9NUB1 689 aaPredicted RBP17.65■□□□□ 0.42
CLK1-205ENST00000434813 DSPPQ9NZW4 1301 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 CACNB4O00305 520 aaPredicted RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 MID1O15344 667 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 MPZL2O60487 215 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 B4GALT2O60909 372 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 ADAP00813 363 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 ADORA3P0DMS8 318 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 BMP4P12644 408 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 POU2F1P14859 743 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 TRA2BP62995 288 aaKnown RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 TUBA1BP68363 451 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 CSNK1G2P78368 415 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 IRF3Q14653 427 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 MLC1Q15049 377 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 KIAA1161Q6NSJ0 714 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 NIPAL1Q6NVV3 410 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 TUBA1AQ71U36 451 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 SLC46A3Q7Z3Q1 461 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 UBE3DQ7Z6J8 389 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 ZNF675Q8TD23 568 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 EXOSC8Q96B26 276 aaKnown RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 DDX31Q9H8H2 851 aaKnown RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 TEX10Q9NXF1 929 aaPredicted RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 C5AR2Q9P296 337 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 RHCGQ9UBD6 479 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 ATG2AQ2TAZ0 1938 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 FUOMA2VDF0 154 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 SH3D21A4FU49 640 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 HMGN4O00479 90 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 KPNA4O00629 521 aaPredicted RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 OR1F1O43749 312 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 AIREO43918 545 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 PCDH8O95206 1070 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 KAT7O95251 611 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 GASTP01350 101 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 CHMP24386 653 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 GJA4P35212 333 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 CLK1P49759 484 aaKnown RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 MAPK11Q15759 364 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 CST6Q15828 149 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 TANGO2Q6ICL3 276 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 TMEM184AQ6ZMB5 413 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 FAM92BQ6ZTR7 304 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 CACUL1Q86Y37 369 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 STX19Q8N4C7 294 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 DHRS1Q96LJ7 313 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 MROQ9BYG7 248 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 DCSTAMPQ9H295 470 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 MBNL1Q9NR56 388 aaKnown RBP17.64■□□□□ 0.41
CLK1-205ENST00000434813 TAS2R7Q9NYW3 318 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 WDR37Q9Y2I8 494 aa17.64■□□□□ 0.41
CLK1-205ENST00000434813 LINC01565O15544 149 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 CLEC3AO75596 197 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 STSP08842 583 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 TGFBR1P36897 503 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 CRISP1P54107 249 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 HYAL1Q12794 435 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 OXA1LQ15070 435 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 IRF4Q15306 451 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 ANKRD54Q6NXT1 300 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 VITQ6UXI7 678 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 YAF2Q8IY57 180 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 TDHQ8IZJ6 230 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 C9orf43Q8TAL5 461 aaPredicted RBP17.63■□□□□ 0.41
CLK1-205ENST00000434813 RASSF5Q8WWW0 418 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 RSPH9Q9H1X1 276 aaPredicted RBP17.63■□□□□ 0.41
CLK1-205ENST00000434813 OR1A2Q9Y585 309 aa17.63■□□□□ 0.41
CLK1-205ENST00000434813 A0A0A6YYD5 115 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 TRBV4-1A0A0J9YWV2 114 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 M0R129 80 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 GADD45AP24522 165 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 TRIM23P36406 574 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 ST3GAL4Q11206 333 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 RUNX3Q13761 415 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
CLK1-205ENST00000434813 INAQ16352 499 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 FRMPD2BQ6IN97 320 aa17.62■□□□□ 0.41
CLK1-205ENST00000434813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.62■□□□□ 0.41
CLK1-205ENST00000434813 RAB8BQ92930 207 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms