RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 MRPS33Q9Y291 106 aaKnown RBP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 YARS2Q9Y2Z4 477 aaKnown RBP10.91□□□□□ -0.66
HDAC4-202ENST00000430200 ACOT9Q9Y305 439 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 RNF11Q9Y3C5 154 aa10.91□□□□□ -0.66
HDAC4-202ENST00000430200 MAP1AP78559 2803 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 DOCK7Q96N67 2140 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ZNF469Q96JG9 3925 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 A0A088AWK7 358 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 A0A1W2PR48 441 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 GLOD5A6NK44 160 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 CLDN4O14493 209 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 GLSO94925 669 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 LRATO95237 230 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ACSL3O95573 720 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 AIFM1O95831 613 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 TUBB4AP04350 444 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 TPOP07202 933 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 EPB42P16452 691 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ENDOUP21128 410 aaKnown RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ZNF10P21506 573 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 CPN2P22792 545 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 STT3AP46977 705 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 DNASE1L1P49184 302 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 NEK2P51955 445 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 FOXO1Q12778 655 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 STX4Q12846 297 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 SLAMF1Q13291 335 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 TMEM35AQ53FP2 167 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 OR4C11Q6IEV9 310 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 HSDL2Q6YN16 418 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 MYLK4Q86YV6 388 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 MMP21Q8N119 569 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 TMEM132CQ8N3T6 1108 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 PTGR2Q8N8N7 351 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 MORN4Q8NDC4 146 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 FAM57AQ8TBR7 257 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ASB15Q8WXK1 588 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 FUT8Q9BYC5 575 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 DEFB127Q9H1M4 99 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ZDHHC11Q9H8X9 412 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 PROK2Q9HC23 129 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 SH2D2AQ9NP31 389 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
HDAC4-202ENST00000430200 XPR1Q9UBH6 696 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 ASB4Q9Y574 426 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 CLCA3PQ9Y6N3 262 aa10.9□□□□□ -0.66
HDAC4-202ENST00000430200 A0A087X1B8 175 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 LRRC3CA6NJW4 275 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 A8MVJ9 347 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 E9PLN8 166 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PPP6CO00743 305 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 KLHL2O95198 593 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 CLDN14O95500 239 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 MYBL2P10244 700 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ESRRAP11474 423 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 GFAPP14136 432 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 GCAP28676 217 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PTGS2P35354 604 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 SOX18P35713 384 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 MAGEA5P43359 124 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 SERPINB8P50452 374 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ALDH18A1P54886 795 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ASPHQ12797 758 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ILF2Q12905 390 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 GTF2H2Q13888 395 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PCBP2Q15366 365 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 CPSF6Q16630 551 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 GTF2H2CQ6P1K8 395 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ZCCHC7Q8N3Z6 543 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 TMEM251Q8N6I4 163 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 POGLUT1Q8NBL1 392 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PHF10Q8WUB8 498 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 DCAKDQ8WVC6 231 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 SLC44A1Q8WWI5 657 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 MTFMTQ96DP5 389 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 CMTM7Q96FZ5 175 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PAFAH2Q99487 392 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 VKORC1Q9BQB6 163 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 CCDC77Q9BR77 488 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 VPS11Q9H270 941 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 RPF2Q9H7B2 306 aaKnown RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ACTR8Q9H981 624 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PNPLA3Q9NST1 481 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 HPF1Q9NWY4 346 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 TUBA8Q9NY65 449 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PCTPQ9UKL6 214 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 PPT2Q9UMR5 302 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 ERVK-11Q9UQG0 969 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 TSC22D4Q9Y3Q8 395 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 NF1P21359 2839 aa10.89□□□□□ -0.67
HDAC4-202ENST00000430200 H0YIV9 168 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 CDK2AP1O14519 115 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 PROM1O43490 865 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 CT62P0C5K7 136 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 RFPL3SP0C7P2 107 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 TSPAN8P19075 237 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 AGAP20933 346 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 PIGAP37287 484 aa10.88□□□□□ -0.67
HDAC4-202ENST00000430200 PIK3CBP42338 1070 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms