RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 HMOX2P30519 316 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 SERPINB5P36952 375 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 PPP2R2AP63151 447 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 IFT88Q13099 833 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 DEPDC1Q5TB30 811 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 ZNF468Q5VIY5 522 aaPredicted RBP15.85■□□□□ 0.13
UBE3D-204ENST00000430071 KHDRBS2Q5VWX1 349 aaKnown RBP15.85■□□□□ 0.13
UBE3D-204ENST00000430071 FAM180AQ6UWF9 173 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 OR2L5Q8NG80 312 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 PPP1R14CQ8TAE6 165 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 M1APQ8TC57 530 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 CMTM7Q96FZ5 175 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 HBEGFQ99075 208 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 LPAR4Q99677 370 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 REXO4Q9GZR2 422 aaKnown RBP15.85■□□□□ 0.13
UBE3D-204ENST00000430071 SNX6Q9UNH7 406 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 OSGIN2Q9Y236 505 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 NINQ8N4C6 2090 aa15.85■□□□□ 0.13
UBE3D-204ENST00000430071 IGKV3D-11A0A0A0MRZ8 115 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 URADA6NGE7 173 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 TMEM233B4DJY2 109 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 H3BQF6 201 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 SAP18O00422 153 aaKnown RBP15.84■□□□□ 0.13
UBE3D-204ENST00000430071 NEFHP12036 1026 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 RNH1P13489 461 aaKnown RBP15.84■□□□□ 0.13
UBE3D-204ENST00000430071 IL10P22301 178 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 SERPINB3P29508 390 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 PPP2R1BP30154 601 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 CD96P40200 585 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 PLA2G16P53816 162 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 KCNK10P57789 538 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 GALNT1Q10472 559 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-204ENST00000430071 TUBA3CQ13748 450 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 TMEM35AQ53FP2 167 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 CLEC6AQ6EIG7 209 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 ABHD17CQ6PCB6 329 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 TUBA3EQ6PEY2 450 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 QSOX2Q6ZRP7 698 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 NFAM1Q8NET5 270 aaPredicted RBP15.84■□□□□ 0.13
UBE3D-204ENST00000430071 SELENOMQ8WWX9 145 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 C20orf27Q9GZN8 174 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 RNF32Q9H0A6 362 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 CDCP1Q9H5V8 836 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 PRM3Q9NNZ6 103 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 MMP25Q9NPA2 562 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 PSD3Q9NYI0 1048 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 PPT2Q9UMR5 302 aa15.84■□□□□ 0.13
UBE3D-204ENST00000430071 NCOA6Q14686 2063 aaPredicted RBP15.83■□□□□ 0.13
UBE3D-204ENST00000430071 TCRBV16S1A1N1A0A5B0 115 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 RTCAO00442 366 aaKnown RBP15.83■□□□□ 0.12
UBE3D-204ENST00000430071 KRT6AP02538 564 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 KRT6BP04259 564 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 EDN3P14138 238 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 CHN1P15882 459 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 GRK2P25098 689 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 PTX3P26022 381 aaPredicted RBP15.83■□□□□ 0.12
UBE3D-204ENST00000430071 KRT6CP48668 564 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 ABCE1P61221 599 aaKnown RBP15.83■□□□□ 0.12
UBE3D-204ENST00000430071 PHEXP78562 749 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 BST1Q10588 318 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 ELOAQ14241 798 aaKnown RBP15.83■□□□□ 0.12
UBE3D-204ENST00000430071 EXT1Q16394 746 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 C10orf62Q5T681 223 aaPredicted RBP15.83■□□□□ 0.12
UBE3D-204ENST00000430071 SPINK14Q6IE38 97 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 SCIMPQ6UWF3 145 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 CHSY3Q70JA7 882 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 AGR3Q8TD06 166 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 ELP5Q8TE02 316 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF354BQ96LW1 612 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 CSF3RQ99062 836 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 SORBS1Q9BX66 1292 aaKnown RBP15.83■□□□□ 0.12
UBE3D-204ENST00000430071 PRDM7Q9NQW5 492 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 KLHL1Q9NR64 748 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 OLAHQ9NV23 265 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 SLC5A6Q9Y289 635 aa15.83■□□□□ 0.12
UBE3D-204ENST00000430071 TMEM114B3SHH9 223 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 PLPP1O14494 284 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 AZIN1O14977 448 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 PRAMEF2O60811 474 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 ULK1O75385 1050 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 CRCPO75575 148 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 HSPA4LO95757 839 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 FGF4P08620 206 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 UROSP10746 265 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 JAK1P23458 1154 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 CERS1P27544 350 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 STX3Q13277 289 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 CUL3Q13618 768 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 SH2D4BQ5SQS7 431 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 KANK2Q63ZY3 851 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 TRIM40Q6P9F5 258 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF793Q6ZN11 406 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 BCORP1Q8N888 145 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 FAM47BQ8NA70 645 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 MDS2Q8NDY4 140 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 NR4A3Q92570 626 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 SORT1Q99523 831 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 EML4Q9HC35 981 aaKnown RBP15.82■□□□□ 0.12
UBE3D-204ENST00000430071 MED4Q9NPJ6 270 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 PRDM9Q9NQV7 894 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms