RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CDCA3Q99618 268 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 SSX3Q99909 188 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 RHNO1Q9BSD3 238 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 UBAC1Q9BSL1 405 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 TPPP3Q9BW30 176 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 FTHL17Q9BXU8 183 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 ATXN10Q9UBB4 475 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 POMT2Q9UKY4 750 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 NAP1L2Q9ULW6 460 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 DIMT1Q9UNQ2 313 aaKnown RBP2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 SATB2Q9UPW6 733 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 MGAT4BQ9UQ53 548 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 WDR37Q9Y2I8 494 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 MMP24Q9Y5R2 645 aa2.59□□□□□ -1.99
HMGB1P9-201ENST00000429856 IL16Q14005 1332 aa2.59□□□□□ -2
HMGB1P9-201ENST00000429856 SPATA31D1Q6ZQQ2 1576 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM110-MUSTN1A8MSY1 372 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 A8MVM7 634 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 EEF2KO00418 725 aaKnown RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 E2F3O00716 465 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 P2RX6O15547 441 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ECE2O60344 883 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 NME2P1O60361 137 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 SAP30O75446 220 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CLN5O75503 358 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TOM1L1O75674 476 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 GRAP2O75791 330 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 PAK4O96013 591 aaPredicted RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 KRT8P05787 483 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 SFTPBP07988 381 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 PATE4P0C8F1 98 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 PRSS56P0CW18 603 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CT45A8P0DMV1 189 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CT45A9P0DMV2 189 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 KRT3P12035 628 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ANPEPP15144 967 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 GLRA2P23416 452 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 FCARP24071 287 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ACKR3P25106 362 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 PSMA5P28066 241 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CHRNB4P30926 498 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 FCGR2BP31994 310 aaPredicted RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 DLSTP36957 453 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 OR3A3P47888 321 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ATP12AP54707 1039 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 IRX4P78413 519 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 MYBPC1Q00872 1141 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 HSF2Q03933 536 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 GPR17Q13304 367 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 GPM6BQ13491 265 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CT45A2Q5DJT8 189 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 XKR6Q5GH73 641 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 SLC27A4Q6P1M0 643 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ARHGAP11AQ6P4F7 1023 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TRMT11Q7Z4G4 463 aaKnown RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ISCA2Q86U28 154 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 VASH2Q86V25 355 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 SLC43A2Q8N370 569 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TEX26Q8N6G2 289 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 OTUD6BQ8N6M0 293 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM99Q8N816 258 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 FADS6Q8N9I5 356 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RNF149Q8NC42 400 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 LEMD2Q8NC56 503 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CCDC197Q8NCU1 140 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 OR13C3Q8NGS6 347 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RNF139Q8WU17 664 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 METTL21AQ8WXB1 218 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CTNNBL1Q8WYA6 563 aaPredicted RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM190Q8WZ59 177 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 PHYHIPQ92561 330 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 OSTF1Q92882 214 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM45BQ96B21 275 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 LRR1Q96L50 414 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 FAM218AQ96MZ4 157 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TTC25Q96NG3 672 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 DEFB118Q96PH6 123 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ERGIC2Q96RQ1 377 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TESK2Q96S53 571 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CBWD1Q9BRT8 395 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TCHPQ9BT92 498 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 PUS3Q9BZE2 481 aaKnown RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 NMNAT2Q9BZQ4 307 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ATG10Q9H0Y0 220 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 CPVLQ9H3G5 476 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RIBC2Q9H4K1 309 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RMND5AQ9H871 391 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 VPS37BQ9H9H4 285 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 TBC1D13Q9NVG8 400 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 ATAD3AQ9NVI7 634 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RNF186Q9NXI6 227 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RDH8Q9NYR8 311 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 FLRT3Q9NZU0 649 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 SLC12A6Q9UHW9 1150 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 MRTO4Q9UKD2 239 aaKnown RBP2.58□□□□□ -2
HMGB1P9-201ENST00000429856 FOXJ3Q9UPW0 622 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 NEDD4P46934 1319 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 DISP3Q9P2K9 1392 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 RAD54L2Q9Y4B4 1467 aa2.58□□□□□ -2
HMGB1P9-201ENST00000429856 A0A087WZ39 114 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms