RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ABHD18Q0P651 414 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 TMEM236Q5W0B7 351 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 TCEAL6Q6IPX3 200 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 MACC1Q6ZN28 852 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 C19orf18Q8NEA5 215 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 TCEAL3Q969E4 200 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF347Q96SE7 839 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 RPF2Q9H7B2 306 aaKnown RBP10.17□□□□□ -0.78
TCOF1-204ENST00000427724 FANCFQ9NPI8 374 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 MBNL1Q9NR56 388 aaKnown RBP10.17□□□□□ -0.78
TCOF1-204ENST00000427724 CTPS2Q9NRF8 586 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ANKMY1Q9P2S6 941 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 DNAJB9Q9UBS3 223 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 FER1L6Q2WGJ9 1857 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 A0A1W2PQ72 361 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 A0A1W2PRB8 838 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 SUV39H1O43463 412 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 TNFSF15O95150 251 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 NR2F6P10588 404 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 BMP7P18075 431 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 SLC26A3P40879 764 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 OR1D4P47884 311 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 VBP1P61758 197 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 NKX3-2P78367 333 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 KCNJ8Q15842 424 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 KCTD11Q693B1 232 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ADIPOR2Q86V24 386 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 NLGN4YQ8NFZ3 816 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-204ENST00000427724 OR52E1Q8NGJ3 308 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ERGIC3Q9Y282 383 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ENTPD2Q9Y5L3 495 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 RTTNQ86VV8 2226 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ARHGAP33O14559 1287 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 SIGLEC6O43699 453 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 PCDHGA12O60330 932 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ITIH1P19827 911 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 OPRL1P41146 370 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 PTGR1Q14914 329 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 RFTN2Q52LD8 501 aaPredicted RBP10.17□□□□□ -0.78
TCOF1-204ENST00000427724 CATSPEREQ5SY80 951 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 BORAQ6PGQ7 559 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 CASP12Q6UXS9 341 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 SYVN1Q86TM6 617 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ZDHHC21Q8IVQ6 265 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 DENND6BQ8NEG7 585 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 PHF10Q8WUB8 498 aaKnown RBP10.17□□□□□ -0.78
TCOF1-204ENST00000427724 PATE1Q8WXA2 126 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 F2RL3Q96RI0 385 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 RANBP9Q96S59 729 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 CHRDQ9H2X0 955 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 PTGES2Q9H7Z7 377 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 NEK6Q9HC98 313 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 CMTM6Q9NX76 183 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 SRPK3Q9UPE1 567 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 SNX11Q9Y5W9 270 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 HS3ST3A1Q9Y663 406 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 TMEM202A6NGA9 273 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF195O14628 629 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 FLRT2O43155 660 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 DIRAS1O95057 198 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 IFNGR2P38484 337 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SPIBQ01892 262 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SPANXN4Q5MJ08 99 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 MCATQ8IVS2 390 aaKnown RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 LMNTD1Q8N9Z9 388 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PHOSPHO1Q8TCT1 267 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SLC25A36Q96CQ1 311 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 VPS35Q96QK1 796 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 HDAC8Q9BY41 377 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 DERL2Q9GZP9 239 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 KLHL1Q9NR64 748 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SERINC1Q9NRX5 453 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 WSB2Q9NYS7 404 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 CCDC182A6NF36 153 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF99A8MXY4 864 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SCELO95171 688 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 C1GALT1C1LP0DN25 315 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 GSTM4Q03013 218 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PLEKHM3Q6ZWE6 761 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 LRRC70Q7Z2Q7 622 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 TRIM69Q86WT6 500 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PIANPQ8IYJ0 282 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 OR52B6Q8NGF0 335 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PPP1R14AQ96A00 147 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 AURKBQ96GD4 344 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 FNDC11Q9BVV2 318 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZIM2Q9NZV7 527 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 DKKL1Q9UK85 242 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 MYO10Q9HD67 2058 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SPAARA0A1B0GVQ0 90 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZSCAN5BA6NJL1 495 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 B4GAT1O43505 415 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SAGP10523 405 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 HRH2P25021 359 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PDHA2P29803 388 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ATP4BP51164 291 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 OR2B6P58173 313 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 TRIP6Q15654 476 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms