RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 DGAT2Q96PD7 388 aa16.83■□□□□ 0.28
HERC3-205ENST00000426683 NPAS2Q99743 824 aa16.83■□□□□ 0.28
HERC3-205ENST00000426683 RNF32Q9H0A6 362 aa16.83■□□□□ 0.28
HERC3-205ENST00000426683 CDCP1Q9H5V8 836 aa16.83■□□□□ 0.28
HERC3-205ENST00000426683 TNFRSF12AQ9NP84 129 aa16.83■□□□□ 0.28
HERC3-205ENST00000426683 PPIEQ9UNP9 301 aaKnown RBP16.83■□□□□ 0.28
HERC3-205ENST00000426683 ZNF462Q96JM2 2506 aa16.83■□□□□ 0.28
HERC3-205ENST00000426683 TRBV11-1A0A0K0K1C0 115 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 SERTM1A2A2V5 107 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 C17orf105B2RV13 164 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 STT3AP46977 705 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 CLCN2P51788 898 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 GPR143P51810 404 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 ZNF169Q14929 603 aaPredicted RBP16.82■□□□□ 0.28
HERC3-205ENST00000426683 INPP5JQ15735 1006 aaPredicted RBP16.82■□□□□ 0.28
HERC3-205ENST00000426683 PRR30Q53SZ7 412 aaPredicted RBP16.82■□□□□ 0.28
HERC3-205ENST00000426683 TNFAIP8L3Q5GJ75 292 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 NDUFAF5Q5TEU4 345 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 OR52E8Q6IFG1 317 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 RPS19BP1Q86WX3 136 aaKnown RBP16.82■□□□□ 0.28
HERC3-205ENST00000426683 OR14A16Q8NHC5 309 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 CPT1CQ8TCG5 803 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 CHTF18Q8WVB6 975 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 PGM2Q96G03 612 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 APIPQ96GX9 242 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 TRMOQ9BU70 441 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 DEFB126Q9BYW3 111 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.82■□□□□ 0.28
HERC3-205ENST00000426683 SSU72Q9NP77 194 aaKnown RBP16.82■□□□□ 0.28
HERC3-205ENST00000426683 ABI3Q9P2A4 366 aa16.82■□□□□ 0.28
HERC3-205ENST00000426683 ZNF223Q9UK11 482 aaPredicted RBP16.82■□□□□ 0.28
HERC3-205ENST00000426683 OR5H15A6NDH6 313 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 PGRMC2O15173 223 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 NPHS1O60500 1241 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 GUCY1B2O75343 617 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 GPR75O95800 540 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 BPGMP07738 259 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 MYZAPP0CAP1 466 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 UROSP10746 265 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 ALOX15P16050 662 aaPredicted RBP16.81■□□□□ 0.28
HERC3-205ENST00000426683 ETV4P43268 484 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 ST13P50502 369 aaKnown RBP16.81■□□□□ 0.28
HERC3-205ENST00000426683 TNFSF10P50591 281 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 PLIN5Q00G26 463 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 BTKQ06187 659 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 BIKQ13323 160 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 IGFBP7Q16270 282 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 IMPG1Q17R60 797 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 CLEC6AQ6EIG7 209 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 ZCCHC23Q6ZST2 131 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 LGI4Q8N135 537 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 MORN4Q8NDC4 146 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 OR1N1Q8NGS0 311 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 SREK1Q8WXA9 508 aaKnown RBP16.81■□□□□ 0.28
HERC3-205ENST00000426683 PPWD1Q96BP3 646 aaKnown RBP16.81■□□□□ 0.28
HERC3-205ENST00000426683 RBM18Q96H35 190 aaKnown RBP16.81■□□□□ 0.28
HERC3-205ENST00000426683 MAP10Q9P2G4 905 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 MCM8Q9UJA3 840 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 PCDHGA10Q9Y5H3 936 aa16.81■□□□□ 0.28
HERC3-205ENST00000426683 GABRR3A8MPY1 467 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 AZIN1O14977 448 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 CHRNGP07510 517 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 COX7A2P14406 83 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 FOXK1P85037 733 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 ACSM2AQ08AH3 577 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 SPIN4Q56A73 249 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 SPDYAQ5MJ70 313 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 ACSM2BQ68CK6 577 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 CISD2Q8N5K1 135 aaKnown RBP16.8■□□□□ 0.28
HERC3-205ENST00000426683 SLC2A12Q8TD20 617 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 THAP3Q8WTV1 239 aaPredicted RBP16.8■□□□□ 0.28
HERC3-205ENST00000426683 MIB2Q96AX9 1013 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 TM4SF18Q96CE8 201 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 OR8D2Q9GZM6 311 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 RRAGDQ9NQL2 400 aaPredicted RBP16.8■□□□□ 0.28
HERC3-205ENST00000426683 ANKRD10Q9NXR5 420 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 FIS1Q9Y3D6 152 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 PCDHA9Q9Y5H5 950 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 ACTL7BQ9Y614 415 aa16.8■□□□□ 0.28
HERC3-205ENST00000426683 TRAV17A0A0B4J275 112 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 C1orf226A1L170 272 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 PCDH7O60245 1069 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 OR10H2O60403 315 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 ZFAND5O76080 213 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 DDAH2O95865 285 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 PIK3R1P27986 724 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 MLF1P58340 268 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 TRA2BP62995 288 aaKnown RBP16.79■□□□□ 0.28
HERC3-205ENST00000426683 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
HERC3-205ENST00000426683 TUBA3CQ13748 450 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 ARL13AQ5H913 290 aaPredicted RBP16.79■□□□□ 0.28
HERC3-205ENST00000426683 TUBA3EQ6PEY2 450 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 DGAT2L6Q6ZPD8 337 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 TRIM46Q7Z4K8 759 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 ST13P4Q8IZP2 240 aaPredicted RBP16.79■□□□□ 0.28
HERC3-205ENST00000426683 MMP21Q8N119 569 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 ZNF321PQ8N8H1 164 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 SNRNP40Q96DI7 357 aaKnown RBP16.79■□□□□ 0.28
HERC3-205ENST00000426683 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
HERC3-205ENST00000426683 UTP23Q9BRU9 249 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms