RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KCNE3Q9Y6H6 103 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 CD72P21854 359 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 CHMP24386 653 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 PCGF2P35227 344 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 PRMT2P55345 433 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 GRSF1Q12849 480 aaKnown RBP eCLIP12.68□□□□□ -0.383e-6■■□□□ 12.8
MCF2L-213ENST00000421756 TEAD4Q15561 434 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TAB1Q15750 504 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 NDUFAF5Q5TEU4 345 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KHDRBS2Q5VWX1 349 aaKnown RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 FAM71E1Q6IPT2 247 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KIAA1211LQ6NV74 962 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ARMC8Q8IUR7 673 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 LINC01555Q8NAE3 123 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 OR4D11Q8NGI4 311 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 COQ8BQ96D53 544 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 DOK1Q99704 481 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ERVK13-1Q9NX77 482 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 FBXL12Q9NXK8 326 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SPHK1Q9NYA1 384 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ZNF226Q9NYT6 803 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TMEM9Q9P0T7 183 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 BTNL2Q9UIR0 455 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ARHGEF17Q96PE2 2063 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 EDDM13A0A1B0GTR0 161 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 CTDSP2O14595 271 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 B4GALT2O60909 372 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 CNOT3O75175 753 aaKnown RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TNFRSF21O75509 655 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KLHL18O94889 574 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 GRK3P35626 688 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 UBE3AQ05086 875 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KCNC3Q14003 757 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 VEZF1Q14119 521 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 LTB4RQ15722 352 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 MICAQ29983 383 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ANKRD13BQ86YJ7 626 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 OR8H2Q8N162 312 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 KCT2Q8NC54 265 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 DNAJB8Q8NHS0 232 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SLC9A6Q92581 669 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 ITPAQ9BY32 194 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 PLA2G2FQ9BZM2 168 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 C6orf106Q9H6K1 298 aaPredicted RBP12.68□□□□□ -0.38
MCF2L-213ENST00000421756 BRF2Q9HAW0 419 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 SNTG1Q9NSN8 517 aa12.68□□□□□ -0.38
MCF2L-213ENST00000421756 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 ITGAMP11215 1152 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 KELP23276 732 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 ITGB7P26010 798 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 CERS1P27544 350 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 SNRPNP63162 240 aaKnown RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 CDKL4Q5MAI5 379 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 REEP3Q6NUK4 255 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 PNCKQ6P2M8 343 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 OR2L2Q8NH16 312 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 TM4SF18Q96CE8 201 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 CEP19Q96LK0 163 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 RSPO3Q9BXY4 272 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 GPN2Q9H9Y4 310 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 TRIOBPQ9H2D6 2365 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 FRYLO94915 3013 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 CPSF4LA6NMK7 179 aaKnown RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 C1QTNF3-AMACRE9PGA6 284 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 M0R082 166 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 EIF3FO00303 357 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 KPNA4O00629 521 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 FFAR1O14842 300 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 LILRB5O75023 590 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 NFATC1O95644 943 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 JUNBP17275 347 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 DCDC1P59894 354 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 TUBA3CQ13748 450 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 DOC2BQ14184 412 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 IQCHQ86VS3 1027 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 COMTD1Q86VU5 262 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 DCUN1D3Q8IWE4 304 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 GHDCQ8N2G8 530 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 TSACCQ96A04 125 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 PIP5K1AQ99755 562 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 BHLHE41Q9C0J9 482 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 MKRN2Q9H000 416 aaKnown RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 POLR2J3Q9H1A7 115 aaKnown RBP12.67□□□□□ -0.38
MCF2L-213ENST00000421756 TMEM45AQ9NWC5 275 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 CNIH4Q9P003 139 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 ERGIC3Q9Y282 383 aa12.67□□□□□ -0.38
MCF2L-213ENST00000421756 A8MV72 311 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms