RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TGFB1P01137 390 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 C1SP09871 688 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 TNK1Q13470 666 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 CCSMST1Q4G0I0 132 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 IL20RBQ6UXL0 311 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 RSPO2Q6UXX9 243 aaPredicted RBP15.85■□□□□ 0.13
PKP4-204ENST00000421462 UNC5DQ6UXZ4 953 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 CEACAM20Q6UY09 585 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 POF1BQ8WVV4 589 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 OTULINQ96BN8 352 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 ART5Q96L15 291 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 HTATIP2Q9BUP3 242 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 TMEM245Q9H330 911 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 RDH14Q9HBH5 336 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
PKP4-204ENST00000421462 ALPK3Q96L96 1907 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 PRRG1O14668 218 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 FFAR1O14842 300 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 GLB1LQ6UWU2 654 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 GPR155Q7Z3F1 870 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 AKAP1Q92667 903 aaKnown RBP eCLIP15.85■□□□□ 0.13
PKP4-204ENST00000421462 OTUB1Q96FW1 271 aaPredicted RBP15.85■□□□□ 0.13
PKP4-204ENST00000421462 DCLRE1CQ96SD1 692 aaKnown RBP15.85■□□□□ 0.13
PKP4-204ENST00000421462 C1QTNF6Q9BXI9 259 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.85■□□□□ 0.132e-7■■□□□ 14.5
PKP4-204ENST00000421462 NIPAL2Q9H841 368 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 SLC25A19Q9HC21 320 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 ADARB2Q9NS39 739 aaKnown RBP15.85■□□□□ 0.13
PKP4-204ENST00000421462 ZNF282Q9UDV7 671 aaPredicted RBP15.85■□□□□ 0.13
PKP4-204ENST00000421462 PCDHB7Q9Y5E2 793 aa15.85■□□□□ 0.13
PKP4-204ENST00000421462 USP34Q70CQ2 3546 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 A0A1B0GVM2 712 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 IL1AP01583 271 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 RPL17P18621 184 aaKnown RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 SPAM1P38567 509 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 ABATP80404 500 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 RING1Q06587 406 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 C2orf80Q0P641 193 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 RPA4Q13156 261 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 CXorf57Q6NSI4 855 aaKnown RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 PLEKHM3Q6ZWE6 761 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 L3MBTL4Q8NA19 623 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 WFDC5Q8TCV5 224 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 GPR62Q9BZJ7 368 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 MED28Q9H204 178 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 NPIPB15A6NHN6 443 aaPredicted RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 CD8B2A6NJW9 211 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 SNTNA6NMZ2 147 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 BCHEP06276 602 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 CD8BP10966 210 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 POLR2CP19387 275 aaPredicted RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 NSG1P42857 185 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 PXNP49023 591 aaPredicted RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 MVDP53602 400 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 PFN3P60673 137 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 RAE1P78406 368 aaKnown RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 FABP5Q01469 135 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 MLLT11Q13015 90 aaPredicted RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 DCST1Q5T197 706 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 MACC1Q6ZN28 852 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 GDPGP1Q6ZNW5 385 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 MSANTD1Q6ZTZ1 278 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 MRPL10Q7Z7H8 261 aaKnown RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 THOC6Q86W42 341 aaKnown RBP15.84■□□□□ 0.13
PKP4-204ENST00000421462 SLC30A8Q8IWU4 369 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 OR52I1Q8NGK6 324 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 HUS1BQ8NHY5 278 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 FUBP3Q96I24 572 aaKnown RBP eCLIP15.84■□□□□ 0.13
PKP4-204ENST00000421462 WFDC6Q9BQY6 131 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 OR51B5Q9H339 312 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 CORO2BQ9UQ03 480 aa15.84■□□□□ 0.13
PKP4-204ENST00000421462 C5orf58C9J3I9 102 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 SLC30A4O14863 429 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 AKAP8O43823 692 aaKnown RBP15.83■□□□□ 0.13
PKP4-204ENST00000421462 SLC22A5O76082 557 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 PAHP00439 452 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 OSMP13725 252 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 CSKP41240 450 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 SMSP52788 366 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 B4GALNT1Q00973 533 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 PUM1Q14671 1186 aaKnown RBP eCLIP15.83■□□□□ 0.13
PKP4-204ENST00000421462 ANXA8L1Q5VT79 327 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 PROKR2Q8NFJ6 384 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 BEST4Q8NFU0 473 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 SLC9A6Q92581 669 aa15.83■□□□□ 0.13
PKP4-204ENST00000421462 LOC105369274A0A096LPK9 316 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 ANKDD1BA6NHY2 528 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 NR2F6P10588 404 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 DDCP20711 480 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 PTNP21246 168 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 PPIBP23284 216 aaKnown RBP15.83■□□□□ 0.12
PKP4-204ENST00000421462 SOX9P48436 509 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 AGFG1P52594 562 aaKnown RBP15.83■□□□□ 0.12
PKP4-204ENST00000421462 AP2S1P53680 142 aaPredicted RBP15.83■□□□□ 0.12
PKP4-204ENST00000421462 PIN1Q13526 163 aaPredicted RBP15.83■□□□□ 0.12
PKP4-204ENST00000421462 ZBTB37Q5TC79 503 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 ZNF730Q6ZMV8 503 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 TMPRSS11BQ86T26 416 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 OR4N4Q8N0Y3 316 aa15.83■□□□□ 0.12
PKP4-204ENST00000421462 C9orf62Q8N4C0 152 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms