RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TRAF6Q9Y4K3 522 aa17.44■□□□□ 0.38
PTCD3-204ENST00000418628 PRRC2CQ9Y520 2896 aaKnown RBP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 WDR91A4D1P6 747 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 PCDH7O60245 1069 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 SNUPNO95149 360 aaKnown RBP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 PRB1P04280 392 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 NEFHP12036 1026 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 BGNP21810 368 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 TLX1P31314 330 aaPredicted RBP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 FOLH1Q04609 750 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 RAPSNQ13702 412 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 BTBD16Q32M84 506 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 SH2D4BQ5SQS7 431 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ARMC10Q8N2F6 343 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF843Q8N446 348 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ANKRD42Q8N9B4 389 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 C7orf57Q8NEG2 295 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 B3GNT7Q8NFL0 401 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 FAM76AQ8TAV0 307 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 BRIX1Q8TDN6 353 aaKnown RBP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 UCN3Q969E3 161 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ALOXE3Q9BYJ1 711 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF71Q9NQZ8 489 aaPredicted RBP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF446Q9NWS9 450 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF223Q9UK11 482 aaPredicted RBP17.43■□□□□ 0.38
PTCD3-204ENST00000418628 PCDHA9Q9Y5H5 950 aa17.43■□□□□ 0.38
PTCD3-204ENST00000418628 C1orf226A1L170 272 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 GSTM5P46439 218 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 STT3AP46977 705 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 ABCE1P61221 599 aaKnown RBP17.42■□□□□ 0.38
PTCD3-204ENST00000418628 BST1Q10588 318 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 BIKQ13323 160 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 CRB2Q5IJ48 1285 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 ASB18Q6ZVZ8 466 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 RAB3IL1Q8TBN0 382 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 PTPMT1Q8WUK0 201 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-204ENST00000418628 NPAS2Q99743 824 aa17.42■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF395Q9H8N7 513 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-204ENST00000418628 ZBTB20Q9HC78 741 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-204ENST00000418628 G3BP2Q9UN86 482 aaKnown RBP17.42■□□□□ 0.38
PTCD3-204ENST00000418628 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-204ENST00000418628 ARHGAP10A1A4S6 786 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 WASHC1A8K0Z3 465 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 SLC28A1O00337 649 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 PIP5K1BO14986 540 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 LSM1O15116 133 aaKnown RBP17.41■□□□□ 0.38
PTCD3-204ENST00000418628 PGRMC2O15173 223 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 SNNO75324 88 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-204ENST00000418628 GUCY1B2O75343 617 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 MYO1DO94832 1006 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 GPR75O95800 540 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 ALPPP05187 535 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 GALNSP34059 522 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 CD97P48960 835 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 ID2Q02363 134 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 STX4Q12846 297 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 MFAP5Q13361 173 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 IMPG1Q17R60 797 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 HHATQ5VTY9 493 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 AGAP7PQ5VUJ5 663 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 SLC48A1Q6P1K1 146 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 ST13P4Q8IZP2 240 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-204ENST00000418628 MMP21Q8N119 569 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 RBMXL3Q8N7X1 1067 aaKnown RBP17.41■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF781Q8N8C0 355 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 OR14A16Q8NHC5 309 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 AGAP4Q96P64 663 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 WDR41Q9HAD4 459 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 HEY2Q9UBP5 337 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 FIS1Q9Y3D6 152 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 RAP2CQ9Y3L5 183 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 SVILO95425 2214 aa17.41■□□□□ 0.38
PTCD3-204ENST00000418628 A0A1W2PS29 197 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 GLOD5A6NK44 160 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 HMGB1P1B2RPK0 211 aaPredicted RBP17.4■□□□□ 0.38
PTCD3-204ENST00000418628 DDAH2O95865 285 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 CHEK2O96017 543 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 SLC1A6P48664 564 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 ACTN3Q08043 901 aaPredicted RBP17.4■□□□□ 0.38
PTCD3-204ENST00000418628 ZNF763Q0D2J5 394 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 SPRED3Q2MJR0 410 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 ISLR2Q6UXK2 745 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 DGAT2L6Q6ZPD8 337 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 OR4N5Q8IXE1 308 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 LGI4Q8N135 537 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 TMEM132CQ8N3T6 1108 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 KIF2BQ8N4N8 673 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 PPP1R14CQ8TAE6 165 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 C16orf78Q8WTQ4 265 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 LMF1Q96S06 567 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 EBPLQ9BY08 206 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 RNF32Q9H0A6 362 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 MYNNQ9NPC7 610 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 PNO1Q9NRX1 252 aaKnown RBP17.4■□□□□ 0.38
PTCD3-204ENST00000418628 C1orf109Q9NX04 203 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 NKIRAS1Q9NYS0 192 aa17.4■□□□□ 0.38
PTCD3-204ENST00000418628 ZGRF1Q86YA3 2104 aa17.39■□□□□ 0.38
PTCD3-204ENST00000418628 A8MUA0 341 aa17.39■□□□□ 0.37
PTCD3-204ENST00000418628 RGS14O43566 566 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms