RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SNAP29O95721 258 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PTBP3O95758 552 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TGM6O95932 706 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 OR52Z1P0C646 297 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 HNRNPCL4P0DMR1 293 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 T-ENOLP0DO92 83 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 RAP2AP10114 183 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 ENO3P13929 434 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 BRAFP15056 766 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 IGFBP2P18065 325 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 RAB3AP20336 220 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 WARSP23381 471 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 DCKP27707 260 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CD1CP29017 333 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 UGT2B10P36537 528 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 ATP5OP48047 213 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PIK3CGP48736 1102 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 GZMKP49863 264 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 NDUFA8P51970 172 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 NDST1P52848 882 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 DRG2P55039 364 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CASP6P55212 293 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TPTEP56180 551 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 SOX8P57073 446 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 COTL1Q14019 142 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 HERC3Q15034 1050 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 SLC39A14Q15043 492 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 DLG2Q15700 870 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 KYNUQ16719 465 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 DEFB113Q30KQ7 82 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 FAM153CQ494X1 144 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 MMEL1Q495T6 779 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 OGFRL1Q5TC84 451 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 C1orf146Q5VVC0 180 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 KIAA1161Q6NSJ0 714 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TTC27Q6P3X3 843 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 SEM1Q6ZVN7 128 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PLEKHM3Q6ZWE6 761 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TECPR1Q7Z6L1 1165 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 KRTAP1-3Q8IUG1 177 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 LIX1LQ8IVB5 337 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CCDC117Q8IWD4 279 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 DAW1Q8N136 415 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TMEM161BQ8NDZ6 487 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 IL17RDQ8NFM7 739 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 LRRC20Q8TCA0 184 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 BLOC1S5Q8TDH9 187 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CT55Q8WUE5 264 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PTP4A1Q93096 173 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 ATP6V1E2Q96A05 226 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 LCORQ96JN0 433 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CDK5RAP1Q96SZ6 601 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CRB3Q9BUF7 120 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CADM1Q9BY67 442 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 SLC17A9Q9BYT1 436 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TRIM54Q9BYV2 358 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 SLC19A3Q9BZV2 496 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PAIP1Q9H074 479 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 C1orf21Q9H246 121 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TRIM45Q9H8W5 580 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 ANKHQ9HCJ1 492 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 ZC4H2Q9NQZ6 224 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 OLFML3Q9NRN5 406 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 SIDT1Q9NXL6 827 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 B3GNT2Q9NY97 397 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 FAM153AQ9UHL3 310 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 ENOPH1Q9UHY7 261 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 POU2F3Q9UKI9 436 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 GUCA1BQ9UMX6 200 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PCDHA7Q9UN72 937 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 CHKBQ9Y259 395 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TLN2Q9Y4G6 2542 aa5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 PRRC2CQ9Y520 2896 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-206ENST00000417628 TGP01266 2768 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 KLF18A0A0U1RQI7 1052 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 UBE2QL1A1L167 161 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TCAF2A6NFQ2 919 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CXorf49A8MYA2 514 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 F8W036 122 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CACNB4O00305 520 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RTCAO00442 366 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RGS16O15492 202 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 OR7A10O76100 309 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 MYO1DO94832 1006 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 IL18RAPO95256 599 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 DEXIO95424 95 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 PAK4O96013 591 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 KRT8P05787 483 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 S100A9P06702 114 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 FAM58BPP0C7Q3 252 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 RAB4AP20338 218 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CDH5P33151 784 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 NNMTP40261 264 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 CD86P42081 329 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 TSFMP43897 325 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 ACOT2P49753 483 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SGSHP51688 502 aa5.21□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC12A3P55017 1021 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms