RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 XKRXQ6PP77 449 aa23.19■■□□□ 1.3
HLA-C-204ENST00000415537 BNC2Q6ZN30 1099 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-204ENST00000415537 PSD4Q8NDX1 1056 aa23.19■■□□□ 1.3
HLA-C-204ENST00000415537 LYARQ9NX58 379 aaKnown RBP23.19■■□□□ 1.3
HLA-C-204ENST00000415537 PSD3Q9NYI0 1048 aa23.19■■□□□ 1.3
HLA-C-204ENST00000415537 XPR1Q9UBH6 696 aa23.19■■□□□ 1.3
HLA-C-204ENST00000415537 ZNF180Q9UJW8 692 aa23.19■■□□□ 1.3
HLA-C-204ENST00000415537 ATG4BQ9Y4P1 393 aa23.19■■□□□ 1.3
HLA-C-204ENST00000415537 KLF2Q9Y5W3 355 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-204ENST00000415537 STX16-NPEPL1H3BU86 382 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 FOXE1O00358 373 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 STX16O14662 325 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 PRRG2O14669 202 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 HNRNPRO43390 633 aaKnown RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 CDC40O60508 579 aaKnown RBP eCLIP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 OR6B1O95007 311 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 ETHE1O95571 254 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 ECHS1P30084 290 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 SOX3P41225 446 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 NEK2P51955 445 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 HNRNPH2P55795 449 aaKnown RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 IGLV3-21P80748 117 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 PLIN5Q00G26 463 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 TTC19Q6DKK2 380 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 ZFP62Q8NB50 900 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 C16orf52Q8NHV5 167 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 WDR20Q8TBZ3 569 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 ZNF721Q8TF20 911 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 MTFMTQ96DP5 389 aaKnown RBP23.18■■□□□ 1.3
HLA-C-204ENST00000415537 ART5Q96L15 291 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 CDK15Q96Q40 435 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 WDR41Q9HAD4 459 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 CRYBG3Q68DQ2 2970 aa23.18■■□□□ 1.3
HLA-C-204ENST00000415537 ARHGAP10A1A4S6 786 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 TRIM49D1C9J1S8 452 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 OR7A17O14581 309 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 PROM1O43490 865 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 HS6ST1O60243 411 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 PTGER1P34995 402 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 LGSNQ5TDP6 509 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 EID3Q8N140 333 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 OR52B6Q8NGF0 335 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 KIF18AQ8NI77 898 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 DCAKDQ8WVC6 231 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 PPWD1Q96BP3 646 aaKnown RBP23.17■■□□□ 1.3
HLA-C-204ENST00000415537 SENP5Q96HI0 755 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-204ENST00000415537 SERPINI1Q99574 410 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 NTMT1Q9BV86 223 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 DDX31Q9H8H2 851 aaKnown RBP23.17■■□□□ 1.3
HLA-C-204ENST00000415537 MEMO1Q9Y316 297 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 EML6Q6ZMW3 1958 aa23.17■■□□□ 1.3
HLA-C-204ENST00000415537 EXOC1LA0A1B0GW35 172 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 ZNHIT1O43257 154 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 EEDO75530 441 aaKnown RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 PRKRAO75569 313 aaKnown RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 SNRPAP09012 282 aaKnown RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 FAM58BPP0C7Q3 252 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 ALOX15P16050 662 aaPredicted RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 BSGP35613 385 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 ADORA2A-AS1P86434 159 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 PLGLB1Q02325 96 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 OPN5Q6U736 354 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 NUDT13Q86X67 352 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 CEP112Q8N8E3 955 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 AGAP11Q8TF27 550 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 MARVELD3Q96A59 401 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 MRPL57Q9BQC6 102 aaKnown RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 PELOQ9BRX2 385 aaKnown RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 ZNF717Q9BY31 904 aaPredicted RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 MRPL46Q9H2W6 279 aaKnown RBP23.16■■□□□ 1.3
HLA-C-204ENST00000415537 RUBCNLQ9H714 662 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 PCTPQ9UKL6 214 aa23.16■■□□□ 1.3
HLA-C-204ENST00000415537 A0A0A6YYD5 115 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 ACOT7O00154 380 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 OR10H2O60403 315 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 NR2F6P10588 404 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 ZNF750Q32MQ0 723 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 MRM1Q6IN84 353 aaKnown RBP23.15■■□□□ 1.3
HLA-C-204ENST00000415537 RTL4Q6ZR62 310 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 MILR1Q7Z6M3 343 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 ST13P4Q8IZP2 240 aaPredicted RBP23.15■■□□□ 1.3
HLA-C-204ENST00000415537 SGCZQ96LD1 299 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 CHST11Q9NPF2 352 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.15■■□□□ 1.36e-7■■□□□ 11.9
HLA-C-204ENST00000415537 PPT2Q9UMR5 302 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 NFU1Q9UMS0 254 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 ASB4Q9Y574 426 aa23.15■■□□□ 1.3
HLA-C-204ENST00000415537 PCNX1Q96RV3 2341 aa23.14■■□□□ 1.3
HLA-C-204ENST00000415537 NCOA6Q14686 2063 aaPredicted RBP23.14■■□□□ 1.29
HLA-C-204ENST00000415537 A0A1B0GTH9 108 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 TMPRSS11DO60235 418 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 GPR75O95800 540 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 AGAP20933 346 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 HTR1EP28566 365 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 PTGS2P35354 604 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 IFT88Q13099 833 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 MPEG1Q2M385 716 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 C10orf62Q5T681 223 aaPredicted RBP23.14■■□□□ 1.29
HLA-C-204ENST00000415537 FRG2Q64ET8 278 aa23.14■■□□□ 1.29
HLA-C-204ENST00000415537 PAOXQ6QHF9 649 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms