RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SLC22A18Q96BI1 424 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 TSNARE1Q96NA8 513 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 PRAP1Q96NZ9 151 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 GPR22Q99680 433 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CPNE1Q99829 537 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 EGFL8Q99944 293 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 MACROD1Q9BQ69 325 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 SELENOSQ9BQE4 189 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 B3GNT4Q9C0J1 378 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 TINAGL1Q9GZM7 467 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 TWSG1Q9GZX9 223 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ACTL8Q9H568 366 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 PARVBQ9HBI1 364 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 MRPS30Q9NP92 439 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 LHX9Q9NQ69 397 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CCDC177Q9NQR7 707 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 NECTIN3Q9NQS3 549 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 FBXO34Q9NWN3 711 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 ARL15Q9NXU5 204 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 NSMCE4AQ9NXX6 385 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 EURLQ9NYK6 297 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CTNNAL1Q9UBT7 734 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 MID2Q9UJV3 735 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 PADI1Q9ULC6 663 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 CORO1CQ9ULV4 474 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 PLCL2Q9UPR0 1127 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 V9GYY5 206 aaPredicted RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 BSNQ9UPA5 3926 aa4.64□□□□□ -1.67
VPS41-205ENST00000414632 SPENQ96T58 3664 aaKnown RBP4.64□□□□□ -1.67
VPS41-205ENST00000414632 A0A1B0GTL3 188 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 FEZF1A0PJY2 475 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 C9orf118A6NHY6 69 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 H0YGG7 62 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 H3BMH7 237 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 M0QYG6 137 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 MASP2O00187 686 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 RAB27BO00194 218 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ETV2O00321 342 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 SLC16A5O15375 505 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ZSCAN9O15535 394 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 P2RX6O15547 441 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 AGFG2O95081 481 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 WISP3O95389 354 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 TNFRSF6BO95407 300 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 MT-ND3P03897 115 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SERPIND1P05546 499 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 GSTA2P09210 222 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 HIST1H2AGP0C0S8 130 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 PIM1P11309 404 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 CDH1P12830 882 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 CD1DP15813 335 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 STMN1P16949 149 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 HIST1H2ADP20671 130 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ITGAXP20702 1163 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PHBP35232 272 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SPRP35270 261 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 RORAP35398 523 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 GDF5P43026 501 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 OR1D4P47884 311 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PTTG1IPP53801 180 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 RAB10P61026 200 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ARF3P61204 181 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 PRDX1Q06830 199 aaKnown RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 DLG1Q12959 904 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 CHAF1BQ13112 559 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SSPNQ14714 243 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ARHGAP19Q14CB8 494 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PPP1R3AQ16821 1122 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 TIGD6Q17RP2 521 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 DEFB109BQ30KR1 87 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 GLE1Q53GS7 698 aaKnown RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 TAF1BQ53T94 588 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 COLEC12Q5KU26 742 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 WASHC2DQ5SRD0 308 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 GRTP1Q5TC63 336 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 LRRC8EQ6NSJ5 796 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 FBXO42Q6P3S6 717 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 MZT2AQ6P582 158 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 CYB5D1Q6P9G0 228 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PCSK4Q6UW60 755 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 FAM198BQ6UWH4 519 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SHISA6Q6ZSJ9 500 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PAQR7Q86WK9 346 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 IFT20Q8IY31 132 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 TTC29Q8NA56 475 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 ZCCHC10Q8TBK6 192 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 KCTD4Q8WVF5 259 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 CFHR4Q92496 578 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PTERQ96BW5 349 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ZBTB9Q96C00 473 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 MBD6Q96DN6 1003 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 LCORQ96JN0 433 aaPredicted RBP4.63□□□□□ -1.67
VPS41-205ENST00000414632 CYTH2Q99418 400 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 PAFAH2Q99487 392 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 H2AFJQ9BTM1 129 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SEMA4CQ9C0C4 833 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 SPNS1Q9H2V7 528 aa4.63□□□□□ -1.67
VPS41-205ENST00000414632 ALG9Q9H6U8 611 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms