RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SEMA7AO75326 666 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 NEURL1O76050 574 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 ZFAND5O76080 213 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 AGFG2O95081 481 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 DDAH2O95865 285 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 PROCP04070 461 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 KLK1P06870 262 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 NR2F6P10588 404 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 EDN3P14138 238 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 CD46P15529 392 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 KRT4P19013 534 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 CRHR1P34998 444 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 CYB561P49447 251 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 ZNF324BQ6AW86 544 aaPredicted RBP13.79□□□□□ -0.2
LIMS4-201ENST00000413601 ZYG11AQ6WRX3 759 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 C16orf47Q6ZP98 133 aaPredicted RBP13.79□□□□□ -0.2
LIMS4-201ENST00000413601 DGAT2L6Q6ZPD8 337 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 GPRIN3Q6ZVF9 776 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 ZNF227Q86WZ6 799 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 METTL4Q8N3J2 472 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 HORMAD2Q8N7B1 307 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 CCNYL1Q8N7R7 359 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
LIMS4-201ENST00000413601 C5orf34Q96MH7 638 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 DGAT2Q96PD7 388 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 SLX1AQ9BQ83 275 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 TEX10Q9NXF1 929 aaPredicted RBP13.79□□□□□ -0.2
LIMS4-201ENST00000413601 AHSPQ9NZD4 102 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 GRID1Q9ULK0 1009 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 PCDHGB6Q9Y5F9 930 aa13.79□□□□□ -0.2
LIMS4-201ENST00000413601 HIVEP3Q5T1R4 2406 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 ARHGAP10A1A4S6 786 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 TMEM200CA6NKL6 621 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 COPEO14579 308 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 PLIN3O60664 434 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 ITGA10O75578 1167 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 MLYCDO95822 493 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 AIFM1O95831 613 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 SP1P08047 785 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 TRHRP34981 398 aaPredicted RBP13.78□□□□□ -0.2
LIMS4-201ENST00000413601 STT3AP46977 705 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 HLCSP50747 726 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 LCP2Q13094 533 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 MAPKAPK3Q16644 382 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 CCNYL2Q5T2Q4 361 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 HSDL2Q6YN16 418 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 PAGE2Q7Z2X7 111 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 METTL6Q8TCB7 284 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 DOK4Q8TEW6 326 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 ZNF721Q8TF20 911 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 NR4A3Q92570 626 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 SCMH1Q96GD3 660 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 RBM18Q96H35 190 aaKnown RBP13.78□□□□□ -0.2
LIMS4-201ENST00000413601 GSTO2Q9H4Y5 243 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 WDR41Q9HAD4 459 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 BRF2Q9HAW0 419 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 ADAM29Q9UKF5 820 aa13.78□□□□□ -0.2
LIMS4-201ENST00000413601 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 PGRMC2O15173 223 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 SLC25A12O75746 678 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 OR2J2O76002 312 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 GPR75O95800 540 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 CRYABP02511 175 aaKnown RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 KRT6AP02538 564 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 KRT6BP04259 564 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 NUDT17P0C025 328 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 COX7A2P14406 83 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 ALOX15P16050 662 aaPredicted RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 MST1P26927 711 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 HMOX2P30519 316 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 KRT6CP48668 564 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 TDGF1P3P51864 188 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 PKNOX1P55347 436 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 PLIN5Q00G26 463 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 SLC18A2Q05940 514 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 GALNT1Q10472 559 aaPredicted RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 TBL3Q12788 808 aaKnown RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 BIKQ13323 160 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 ERCC6LQ2NKX8 1250 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 SLC25A25Q6KCM7 469 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 EMBQ6PCB8 327 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 COMMD6Q7Z4G1 85 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 GALNTL5Q7Z4T8 443 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 TMEM156Q8N614 296 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 TMEM178AQ8NBL3 297 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 C7orf57Q8NEG2 295 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 DNAJB8Q8NHS0 232 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 SENP5Q96HI0 755 aaPredicted RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 KCNA7Q96RP8 456 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 TRIM45Q9H8W5 580 aaPredicted RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 MYOTQ9UBF9 498 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 STK38LQ9Y2H1 464 aa13.77□□□□□ -0.21
LIMS4-201ENST00000413601 YARS2Q9Y2Z4 477 aaKnown RBP13.77□□□□□ -0.21
LIMS4-201ENST00000413601 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms