RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 OSGEPL1Q9H4B0 414 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 SYNDIG1Q9H7V2 258 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 ZNF696Q9H7X3 374 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 DCAF13Q9NV06 445 aaKnown RBP16.23■□□□□ 0.19
PTPRC-206ENST00000413409 FOXJ2Q9P0K8 574 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 ZNF282Q9UDV7 671 aaPredicted RBP16.23■□□□□ 0.19
PTPRC-206ENST00000413409 OAZ3Q9UMX2 235 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 WDR37Q9Y2I8 494 aa16.23■□□□□ 0.19
PTPRC-206ENST00000413409 PRAMEF33A0A0G2JMD5 474 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 SPTY2D1-AS1A0A0U1RR47 76 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 DPPA5A6NC42 116 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 GABRR3A8MPY1 467 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 CLIC1O00299 241 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 ACOX3O15254 700 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 TBX19O60806 448 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 PRAMEF10O60809 474 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 TNFAIP8O95379 198 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 FURINP09958 794 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 DDX5P17844 614 aaKnown RBP16.22■□□□□ 0.19
PTPRC-206ENST00000413409 MEF2AQ02078 507 aaPredicted RBP16.22■□□□□ 0.19
PTPRC-206ENST00000413409 NFATC4Q14934 902 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 NHSL2Q5HYW2 709 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 SLC9B2Q86UD5 537 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 ZZZ3Q8IYH5 903 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 LMNTD1Q8N9Z9 388 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 WDR48Q8TAF3 677 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 LMX1AQ8TE12 382 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 C16orf78Q8WTQ4 265 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 MIB2Q96AX9 1013 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 SLC47A1Q96FL8 570 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 ZNF764Q96H86 408 aaPredicted RBP16.22■□□□□ 0.19
PTPRC-206ENST00000413409 SEPHS2Q99611 448 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 OR51B5Q9H339 312 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 PISDQ9UG56 409 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 VPS4AQ9UN37 437 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 EXO1Q9UQ84 846 aaKnown RBP16.22■□□□□ 0.19
PTPRC-206ENST00000413409 KCNK6Q9Y257 313 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 CFAP20Q9Y6A4 193 aaKnown RBP16.22■□□□□ 0.19
PTPRC-206ENST00000413409 CROCCQ5TZA2 2017 aa16.22■□□□□ 0.19
PTPRC-206ENST00000413409 C1orf226A1L170 272 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 PRSS38A1L453 326 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 AGRPO00253 132 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 CCNDBP1O95273 360 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 TGFB1P01137 390 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ABCB1P08183 1280 aaPredicted RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 FAM58BPP0C7Q3 252 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ITIH1P19827 911 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 RPL10P27635 214 aaKnown RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 GSTM2P28161 218 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 SOX11P35716 441 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ETV5P41161 510 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 EIF3IQ13347 325 aaKnown RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 SF1Q15637 639 aaKnown RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 BORAQ6PGQ7 559 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 WASH2PQ6VEQ5 465 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 CLECL1Q8IZS7 167 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 NATD1Q8N6N6 113 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 LINC01555Q8NAE3 123 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ZNF740Q8NDX6 193 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 TTLQ8NG68 377 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 CNBD2Q96M20 576 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 QRFPRQ96P65 431 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 TCEAL2Q9H3H9 227 aaPredicted RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 CARS2Q9HA77 564 aaKnown RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 FGF22Q9HCT0 170 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ZNF71Q9NQZ8 489 aaPredicted RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 CUEDC1Q9NWM3 386 aaPredicted RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 UBAP1Q9NZ09 502 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 DNAJB9Q9UBS3 223 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ADAM29Q9UKF5 820 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 PADI4Q9UM07 663 aa16.21■□□□□ 0.19
PTPRC-206ENST00000413409 SAMD4AQ9UPU9 718 aaKnown RBP16.21■□□□□ 0.19
PTPRC-206ENST00000413409 ANKDD1BA6NHY2 528 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 TOR1BO14657 336 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 YY2O15391 372 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 HPRP00739 348 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 CD97P48960 835 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 ABATP80404 500 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 EIF2B5Q13144 721 aaKnown RBP16.2■□□□□ 0.18
PTPRC-206ENST00000413409 VEZF1Q14119 521 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 RBBP5Q15291 538 aaKnown RBP16.2■□□□□ 0.18
PTPRC-206ENST00000413409 VMACQ2NL98 169 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 ZNF385BQ569K4 471 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 DEPDC1Q5TB30 811 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 KHDRBS2Q5VWX1 349 aaKnown RBP16.2■□□□□ 0.18
PTPRC-206ENST00000413409 ZNF621Q6ZSS3 439 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 PAGE2Q7Z2X7 111 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 ZNF551Q7Z340 670 aaPredicted RBP16.2■□□□□ 0.18
PTPRC-206ENST00000413409 DCP2Q8IU60 420 aaKnown RBP16.2■□□□□ 0.18
PTPRC-206ENST00000413409 C10orf111Q8N326 155 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 FBXO30Q8TB52 745 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 TFAP2CQ92754 450 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 PPCDCQ96CD2 204 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 WDR92Q96MX6 357 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 ACAT2Q9BWD1 397 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 FAM192AQ9GZU8 254 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 CHST8Q9H2A9 424 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 KIR3DX1Q9H7L2 352 aa16.2■□□□□ 0.18
PTPRC-206ENST00000413409 TPT1P8Q9HAU6 139 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 317.6 ms