RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 GALNSP34059 522 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 HTR2BP41595 481 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TNFRSF4P43489 277 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LGALS7P47929 136 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 EIF5P55010 431 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 NUP107P57740 925 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 NOP14P78316 857 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 OCRLQ01968 901 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 GFPT1Q06210 699 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 C17orf67Q0P5P2 114 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 MSLNQ13421 630 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 MTMR1Q13613 665 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 BAATQ14032 418 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CTTNQ14247 550 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZNF460Q14592 562 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 SF3A1Q15459 793 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TAL2Q16559 108 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 HKDC1Q2TB90 917 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 SLC10A6Q3KNW5 377 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LONRF3Q496Y0 759 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ALG10Q5BKT4 473 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ALG10BQ5I7T1 473 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM27D1Q5T7N8 215 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 MFSD12Q6NUT3 480 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LINC00575Q6W349 94 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM184AQ6ZMB5 413 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM47EQ6ZV65 393 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CAMK2N1Q7Z7J9 78 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 Q86TA4 180 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LUZP1Q86V48 1076 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 LRRTM3Q86VH5 581 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 PLA2G4DQ86XP0 818 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM219Q86XT9 240 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FMNL3Q8IVF7 1028 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ARID3BQ8IVW6 561 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 CNTN4Q8IWV2 1026 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 C12orf56Q8IXR9 622 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM105Q8N8V8 129 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 GOLGA6L2Q8N9W4 650 aaPredicted RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM71DQ8N9W8 422 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ATG16L2Q8NAA4 619 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 TMEM87AQ8NBN3 555 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA22Q8NHS9 363 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 SUSD6Q92537 303 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 NCSTNQ92542 709 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNF185Q96GF1 192 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAR2Q96K12 515 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 GPR78Q96P69 363 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 MBOAT4Q96T53 435 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ADAT1Q9BUB4 502 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 AGXT2Q9BYV1 514 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ASPSCR1Q9BZE9 553 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 FAM129AQ9BZQ8 928 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 OR51V1Q9H2C8 321 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 DUSP21Q9H596 190 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZDHHC6Q9H6R6 413 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 RNF167Q9H6Y7 350 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZMAT4Q9H898 229 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 B3GAT2Q9NPZ5 323 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ZSCAN32Q9NX65 697 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 IL1RAPL1Q9NZN1 696 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 VPS51Q9UID3 782 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ITGB1BP2Q9UKP3 347 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 INTS6Q9UL03 887 aaKnown RBP-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 SIGLEC9Q9Y336 463 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 L3MBTL1Q9Y468 752 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 JRKLQ9Y4A0 524 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 ANGPTL3Q9Y5C1 460 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 PCDHGB6Q9Y5F9 930 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 S4R3F8 94 aa-1.86□□□□□ -2.71
RNU4-88P-201ENST00000411220 DNAH14Q0VDD8 3507 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA31A5Q5VU36 1347 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPATA31A7Q8IWB4 1347 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGLV3-9A0A075B6K5 115 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TRAV9-2A0A087WT02 112 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 LOC110117498A0A087WWA1 95 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 IGHV3-16A0A0C4DH30 117 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SPAARA0A1B0GVQ0 90 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 A0A1W2PQL4 384 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 hDV102S1A0JD36 115 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PTGES3LE9PB15 166 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 LOC110117498-PIK3R3F6TDL0 507 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 G3V3Y1 287 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 NEMP1O14524 444 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TXNL1O43396 289 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SYNGR2O43760 224 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 CTSVO60911 334 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 WDR1O75083 606 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SERF1AO75920 110 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 GFPT2O94808 682 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 IL18RAPO95256 599 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 OPN1SWP03999 348 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TACSTD2P09758 323 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 CT62P0C5K7 136 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PSMC3P17980 439 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 VCLP18206 1134 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 PGCP20142 388 aa-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 GBX2P52951 348 aaPredicted RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 SEC61BP60468 96 aaKnown RBP-1.87□□□□□ -2.71
RNU4-88P-201ENST00000411220 TIMM10P62072 90 aa-1.87□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms