RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ANKRD9Q96BM1 317 aaPredicted RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 RBM18Q96H35 190 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 FAM173AQ9BQD7 235 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 TRIM8Q9BZR9 551 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 OR51B5Q9H339 312 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SACM1LQ9NTJ5 587 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 DEPPQ9NTK1 212 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 OTOGQ6ZRI0 2925 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 MYOCOSA0A1B0GUC4 107 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 H0YIV9 168 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 FGF17O60258 216 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 P04436 131 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 C2P06681 752 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 CNR1P21554 472 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 PTX3P26022 381 aaPredicted RBP13.66□□□□□ -0.22
CBX3-203ENST00000409747 IRF9Q00978 393 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 ID2Q02363 134 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
CBX3-203ENST00000409747 MPEG1Q2M385 716 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 NCCRP1Q6ZVX7 275 aaPredicted RBP13.66□□□□□ -0.22
CBX3-203ENST00000409747 ZNF321PQ8N8H1 164 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 OR52N2Q8NGI0 321 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 SLC22A8Q8TCC7 542 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 ZNF721Q8TF20 911 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 SCYL1Q96KG9 808 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 MTERF1Q99551 399 aaKnown RBP13.66□□□□□ -0.22
CBX3-203ENST00000409747 SPOCK3Q9BQ16 436 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 TTTY12Q9BZ98 90 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 ZDHHC11Q9H8X9 412 aa13.66□□□□□ -0.22
CBX3-203ENST00000409747 LYARQ9NX58 379 aaKnown RBP13.66□□□□□ -0.22
CBX3-203ENST00000409747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.66□□□□□ -0.222e-8■□□□□ 8.9
CBX3-203ENST00000409747 A0A096LPK6 155 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 OR14I1A6ND48 311 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 FAM166BA8MTA8 275 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 PLPP1O14494 284 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 KLHL2O95198 593 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 ETHE1O95571 254 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 CUL3Q13618 768 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 PCBP2Q15366 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
CBX3-203ENST00000409747 CDSNQ15517 529 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 TRADDQ15628 312 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 UAP1Q16222 522 aaPredicted RBP13.65□□□□□ -0.22
CBX3-203ENST00000409747 FAM47EQ6ZV65 393 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 DND1Q8IYX4 353 aaKnown RBP13.65□□□□□ -0.22
CBX3-203ENST00000409747 ST13P4Q8IZP2 240 aaPredicted RBP13.65□□□□□ -0.22
CBX3-203ENST00000409747 SENP5Q96HI0 755 aaPredicted RBP13.65□□□□□ -0.22
CBX3-203ENST00000409747 FBXL20Q96IG2 436 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 LURAP1Q96LR2 239 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 DEFB127Q9H1M4 99 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 IL1RL2Q9HB29 575 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 CACNA1CQ13936 2221 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 TACC2O95359 2948 aa13.65□□□□□ -0.22
CBX3-203ENST00000409747 ESYT3A0FGR9 886 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 C19orf84I3L1E1 186 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 BCKDKO14874 412 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 KLK8O60259 260 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 PDE9AO76083 593 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 ALOX15P16050 662 aaPredicted RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 TYK2P29597 1187 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 CHRNB4P30926 498 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 RPS13P62277 151 aaKnown RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 FOLH1Q04609 750 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 GTF2H2Q13888 395 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 GTF2H2CQ6P1K8 395 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 FAM109AQ8N4B1 249 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 SLC15A4Q8N697 577 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 CHTF18Q8WVB6 975 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 MRRFQ96E11 262 aaKnown RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 SORBS1Q9BX66 1292 aaKnown RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 TSPYL1Q9H0U9 437 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 ACSS3Q9H6R3 686 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 WDR41Q9HAD4 459 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 ZDHHC18Q9NUE0 388 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 MTRF1LQ9UGC7 380 aaKnown RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 TMCO1Q9UM00 188 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 CSMD2Q7Z408 3487 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 PINLYPA6NC86 204 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 FIGNL2A6NMB9 653 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 OR10H2O60403 315 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 IGKV3-11P04433 115 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 SLC7A5Q01650 507 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 ASPHQ12797 758 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 ZNF750Q32MQ0 723 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 PIGGQ5H8A4 983 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 ACAD11Q709F0 780 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 TAOK1Q7L7X3 1001 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 SLC29A4Q7RTT9 530 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 GOLGA7Q7Z5G4 137 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 NUDT13Q86X67 352 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 OR4N5Q8IXE1 308 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 SREK1Q8WXA9 508 aaKnown RBP13.64□□□□□ -0.23
CBX3-203ENST00000409747 RND1Q92730 232 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 C14orf79Q96F83 325 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 IPPKQ9H8X2 491 aa13.64□□□□□ -0.23
CBX3-203ENST00000409747 CPSF2Q9P2I0 782 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms