RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 EGLN2Q96KS0 407 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 MARK4Q96L34 752 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 ZBTB18Q99592 522 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 CHST8Q9H2A9 424 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 RPF2Q9H7B2 306 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 WDR54Q9H977 334 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 MIEF1Q9NQG6 463 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 TMEM45AQ9NWC5 275 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 TEX10Q9NXF1 929 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 EHD3Q9NZN3 535 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 ZIM2Q9NZV7 527 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 PCDHGA6Q9Y5G7 932 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 PCDHA9Q9Y5H5 950 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 IGSF10Q6WRI0 2623 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 DNAJB6O75190 326 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 DCTN3O75935 186 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 BMP10O95393 424 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 AIFM1O95831 613 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 RECKO95980 971 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 ITGB2P05107 769 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 RAB40ALP0C0E4 278 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 ADSLP30566 484 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 ALDH9A1P49189 494 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 RPS15P62841 145 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 DNASE1L3Q13609 305 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 DPY19L1Q2PZI1 675 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 MLIPQ5VWP3 458 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 C18orf63Q68DL7 685 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 GLB1L3Q8NCI6 653 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 CLHC1Q8NHS4 586 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 STT3BQ8TCJ2 826 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 TTC9Q92623 222 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 MIEF2Q96C03 454 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 WBP1Q96G27 269 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 ZNF764Q96H86 408 aaPredicted RBP15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 REEP4Q9H6H4 257 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 SLC22A11Q9NSA0 550 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 ATAD3AQ9NVI7 634 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 PADI2Q9Y2J8 665 aa15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 COPG1Q9Y678 874 aaKnown RBP15.54■□□□□ 0.08
TSPAN4-208ENST00000409531 SYNDIG1LA6NDD5 238 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 SCAMP2O15127 329 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 ATXN7O15265 892 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 TBX19O60806 448 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 SLC22A3O75751 556 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 LRATO95237 230 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 CYC1P08574 325 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 ZGLP1P0C6A0 271 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 HSD17B7P56937 341 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 ACTN3Q08043 901 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 NCF4Q15080 339 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 SLC48A1Q6P1K1 146 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 MRPL14Q6P1L8 145 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 FAM198BQ6UWH4 519 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 ZC3H7AQ8IWR0 971 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 SAMD14Q8IZD0 417 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 CPSF7Q8N684 471 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 PPCDCQ96CD2 204 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 BBC3Q96PG8 261 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 CSF3RQ99062 836 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 ZNF385DQ9H6B1 395 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 CTSFQ9UBX1 484 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 ATP6V1HQ9UI12 483 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 FARSAQ9Y285 508 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 MMACHCQ9Y4U1 282 aa15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 MRPS18BQ9Y676 258 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-208ENST00000409531 VSTM2BA6NLU5 285 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 ANKRD28O15084 1053 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 SLC22A2O15244 555 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 AKAP10O43572 662 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 B4GALT2O60909 372 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 CREG1O75629 220 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 FURINP09958 794 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 COX7A2P14406 83 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 GPX3P22352 226 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 PIK3R1P27986 724 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 PTPN4P29074 926 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 UFM1P61960 85 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 SRSF11Q05519 484 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 BIKQ13323 160 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 PDE7AQ13946 482 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 NKG7Q16617 165 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 MINDY4Q4G0A6 757 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 VWA2Q5GFL6 755 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 MFSD4BQ5TF39 518 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 LCN10Q6JVE6 187 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 QSOX2Q6ZRP7 698 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 MTDHQ86UE4 582 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 RIMKLAQ8IXN7 391 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 NATD1Q8N6N6 113 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 GFM2Q969S9 779 aaKnown RBP15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 TESCQ96BS2 214 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 RBCK1Q9BYM8 510 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 NMUR2Q9GZQ4 415 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 ACTL8Q9H568 366 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 CLMPQ9H6B4 373 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 SAR1AQ9NR31 198 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 PRTFDC1Q9NRG1 225 aa15.52■□□□□ 0.08
TSPAN4-208ENST00000409531 GIMAP4Q9NUV9 329 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms