RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FCN2Q15485 313 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SPHARQ15513 63 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 MED22Q15528 200 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 UPP1Q16831 310 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC10A6Q3KNW5 377 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 ARHGAP15Q53QZ3 475 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 XKR4Q5GH76 650 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 CORO6Q6QEF8 472 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 DPH6Q7L8W6 267 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 ACOT1Q86TX2 421 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 MCATQ8IVS2 390 aaKnown RBP10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC34A3Q8N130 599 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 IPMKQ8NFU5 416 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 OR8K3Q8NH51 312 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 LINC00052Q96N35 136 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 NECTIN4Q96NY8 510 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 ERMAPQ96PL5 475 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 HHIPQ96QV1 700 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 FERD3LQ96RJ6 166 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 COLEC11Q9BWP8 271 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 MND1Q9BWT6 205 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 FN3KQ9H479 309 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 ELOVL6Q9H5J4 265 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SEMA4BQ9NPR2 832 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 CATSPERZQ9NTU4 200 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 CLN6Q9NWW5 311 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SLCO1C1Q9NYB5 712 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 MPP6Q9NZW5 540 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 COPZ2Q9P299 210 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 CPNE7Q9UBL6 633 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 EVLQ9UI08 416 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 TMCC3Q9ULS5 477 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 RNF112Q9ULX5 631 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 USP34Q70CQ2 3546 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 CARNS1A5YM72 827 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 LRRC14BA6NHZ5 514 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 MYO1GB0I1T2 1018 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 SUPT3HB4E1H0 165 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 LOC730098B7Z3J9 87 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 KPNA3O00505 521 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 TSC22D2O75157 780 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ECI2O75521 394 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 GLUD1P00367 558 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 VIPP01282 170 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ACPPP15309 386 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ITGALP20701 1170 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ITPKAP23677 461 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 PTPN6P29350 595 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 RORAP35398 523 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 CRISP3P54108 245 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 CDC42P60953 191 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 VLDLRP98155 873 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 RPA4Q13156 261 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 FGFBP1Q14512 234 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 AP5B1Q2VPB7 878 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 EML3Q32P44 896 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 PTCHD3Q3KNS1 767 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 FLYWCH1Q4VC44 716 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 SPIN4Q56A73 249 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 B3GNTL1Q67FW5 361 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 MRNIPQ6NTE8 343 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 RSPO2Q6UXX9 243 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 GCNT7Q6ZNI0 430 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM92BQ6ZTR7 304 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 STPG2Q8N412 459 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF655Q8N720 491 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 NANOGP1Q8N7R0 232 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 OR4D10Q8NGI6 311 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 CLHC1Q8NHS4 586 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.15□□□□□ -0.798e-7■■■■■ 37.1
NIF3L1-204ENST00000409357 FUBP1Q96AE4 644 aaKnown RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM129BQ96TA1 746 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 C12orf57Q99622 126 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 DPCDQ9BVM2 203 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 PHF7Q9BWX1 381 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 DPY30Q9C005 99 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 PITHD1Q9GZP4 211 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC25A51Q9H1U9 297 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ABCC13Q9NSE7 274 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 MS4A12Q9NXJ0 267 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 CD274Q9NZQ7 290 aa10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 ZFR2Q9UPR6 939 aaKnown RBP10.15□□□□□ -0.79
NIF3L1-204ENST00000409357 SCN1AP35498 2009 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 E9PAM4 449 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 NPIPB8E9PQR5 432 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM72CH0Y354 149 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 SMLR1H3BR10 107 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 DNASE2O00115 360 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 AIPO00170 330 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 CBX4O00257 560 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 E2F3O00716 465 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 SMAD6O43541 496 aaKnown RBP10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 RGS14O43566 566 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 SELENOFO60613 162 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC19A2O60779 497 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 B3GAT3O94766 335 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 HSMCR30P0CW71 290 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 SULT1A3P0DMM9 295 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 SULT1A4P0DMN0 295 aa10.14□□□□□ -0.79
NIF3L1-204ENST00000409357 UGT2B7P16662 529 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms