RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 DAPP1Q9UN19 280 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 POLHQ9Y253 713 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 WBP11Q9Y2W2 641 aaKnown RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 PDZD2O15018 2839 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 A0A0A6YYD5 115 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 IDSB3KWA1 339 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 TCP11X1B4DZS4 312 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 C4orf51C9J302 202 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 NPIPB8E9PQR5 432 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 PEX12O00623 359 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 PRMT3O60678 531 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 B4GALT2O60909 372 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 CREG1O75629 220 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 DNAJB5O75953 348 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 B3GALT4O96024 378 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 ANXA4P09525 319 aaPredicted RBP9.92□□□□□ -0.82
RPAIN-204ENST00000405578 KITP10721 976 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 PCSK2P16519 638 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
RPAIN-204ENST00000405578 PRPH2P23942 346 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 TIA1P31483 386 aaKnown RBP eCLIP9.92□□□□□ -0.82
RPAIN-204ENST00000405578 KLC1Q07866 573 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 SLC13A2Q13183 592 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 HEPACAMQ14CZ8 416 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 GALNTL6Q49A17 601 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 CES4AQ5XG92 561 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 GALNT18Q6P9A2 607 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF793Q6ZN11 406 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 FAM9CQ8IZT9 166 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 TANKQ92844 425 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 SPSB2Q99619 263 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 NUF2Q9BZD4 464 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 SIRT5Q9NXA8 310 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 PSME2Q9UL46 239 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 EIF3LQ9Y262 564 aaKnown RBP9.92□□□□□ -0.82
RPAIN-204ENST00000405578 MMACHCQ9Y4U1 282 aa9.92□□□□□ -0.82
RPAIN-204ENST00000405578 ATP6AP2A0A1C7CYW4 349 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 CDC14CA4D256 554 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 LSM1O15116 133 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PEX11AO75192 247 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 EEDO75530 441 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 ATP6AP2O75787 350 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 CDC123O75794 336 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 KLF7O75840 302 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 SORBS2O94875 1100 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 TGDSO95455 350 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 GBAP04062 536 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 VIMP08670 466 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 C8orf89P0DMQ9 161 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 NR2F6P10588 404 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PRF1P14222 555 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 OTX2P32243 289 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 MDH1P40925 334 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 HSD17B7P56937 341 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 RPL38P63173 70 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 TNFRSF17Q02223 184 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF763Q0D2J5 394 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 STX4Q12846 297 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 BIKQ13323 160 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 RUNX2Q13950 521 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 NSDHLQ15738 373 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 SMU1Q2TAY7 513 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 XKR7Q5GH72 579 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 NOXRED1Q6NXP6 359 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 SHISA6Q6ZSJ9 500 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 Q6ZSR9 355 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 FAM47EQ6ZV65 393 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 MED25Q71SY5 747 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 LRRC34Q8IZ02 419 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 TMEM132CQ8N3T6 1108 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 FAM47BQ8NA70 645 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 FNDC5Q8NAU1 212 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 THAP4Q8WY91 577 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 APIPQ96GX9 242 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PPP1R36Q96LQ0 422 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PTCHD1Q96NR3 888 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 MAPKAP1Q9BPZ7 522 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 SIKE1Q9BRV8 207 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF717Q9BY31 904 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 RBCK1Q9BYM8 510 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 TRIM55Q9BYV6 548 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 TUBB1Q9H4B7 451 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 RPF2Q9H7B2 306 aaKnown RBP9.91□□□□□ -0.82
RPAIN-204ENST00000405578 MEAF6Q9HAF1 191 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PRDM9Q9NQV7 894 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PRTFDC1Q9NRG1 225 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 KCMF1Q9P0J7 381 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 LUZP4Q9P127 313 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 CCL27Q9Y4X3 112 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 PTGDR2Q9Y5Y4 395 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
RPAIN-204ENST00000405578 NF1P21359 2839 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 C1orf226A1L170 272 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 CYR61O00622 381 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 PROM1O43490 865 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 DYRK3O43781 588 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 TMPRSS11DO60235 418 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 CTNSO60931 367 aa9.9□□□□□ -0.82
RPAIN-204ENST00000405578 ALOX12BO75342 701 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms