RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MRPL46Q9H2W6 279 aaKnown RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 DDX31Q9H8H2 851 aaKnown RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 ZBTB26Q9HCK0 441 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 SEMA4BQ9NPR2 832 aaPredicted RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 HPF1Q9NWY4 346 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 LYARQ9NX58 379 aaKnown RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 COPS7AQ9UBW8 275 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 PCTPQ9UKL6 214 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 A0A0A6YYD5 115 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 RIPK2O43353 540 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 DYRK3O43781 588 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 TMPRSS11DO60235 418 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 PRKRAO75569 313 aaKnown RBP12.36□□□□□ -0.43
SDF4-203ENST00000403997 GBAP04062 536 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 FAM153BP0C7A2 387 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 RFC3P40938 356 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 STT3AP46977 705 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 HK2P52789 917 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 CDH13P55290 713 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 RNF4P78317 190 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
SDF4-203ENST00000403997 TNFRSF17Q02223 184 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 IFT88Q13099 833 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 FAM153CQ494X1 144 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 SGO1Q5FBB7 561 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 RNFT1Q5M7Z0 435 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 FRG2Q64ET8 278 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 MRM1Q6IN84 353 aaKnown RBP12.36□□□□□ -0.43
SDF4-203ENST00000403997 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 TIFABQ6ZNK6 161 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 RPS27LQ71UM5 84 aaKnown RBP12.36□□□□□ -0.43
SDF4-203ENST00000403997 SPPL2CQ8IUH8 684 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 GPALPP1Q8IXQ4 340 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 GHDCQ8N2G8 530 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 POGLUT1Q8NBL1 392 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 OR5L2Q8NGL0 311 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 OR8K3Q8NH51 312 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 ZNF721Q8TF20 911 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 MTBPQ96DY7 904 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 SENP5Q96HI0 755 aaPredicted RBP12.36□□□□□ -0.43
SDF4-203ENST00000403997 FRG2BQ96QU4 278 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 RASL10BQ96S79 203 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 ZNF717Q9BY31 904 aaPredicted RBP12.36□□□□□ -0.43
SDF4-203ENST00000403997 WDR41Q9HAD4 459 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 TIMMDC1Q9NPL8 285 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 ASB4Q9Y574 426 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 CREBBPQ92793 2442 aa12.36□□□□□ -0.43
SDF4-203ENST00000403997 NOTCH2Q04721 2471 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 A0A1W2PR48 441 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 GLOD5A6NK44 160 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 WASHC1A8K0Z3 465 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 TFECO14948 347 aaPredicted RBP12.35□□□□□ -0.43
SDF4-203ENST00000403997 OR10H2O60403 315 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 OR6B1O95007 311 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 GPR75O95800 540 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 OTCP00480 354 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 ESRRAP11474 423 aaPredicted RBP12.35□□□□□ -0.43
SDF4-203ENST00000403997 ALOX15P16050 662 aaPredicted RBP12.35□□□□□ -0.43
SDF4-203ENST00000403997 TSPAN8P19075 237 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 GCAP28676 217 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 DCTP40126 519 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 SOX3P41225 446 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 GPR85P60893 370 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 PLIN5Q00G26 463 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 TRAF3Q13114 568 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 C3AR1Q16581 482 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 ZNF787Q6DD87 383 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 MTFR2Q6P444 385 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 TMEM151AQ8N4L1 468 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 OR4F6Q8NGB9 312 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 DOK4Q8TEW6 326 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 ART5Q96L15 291 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 ELOVL6Q9H5J4 265 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 AHSPQ9NZD4 102 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 TINAGQ9UJW2 476 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 PPT2Q9UMR5 302 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 ZNF835Q9Y2P0 537 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 ABCA12Q86UK0 2595 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 CROCCQ5TZA2 2017 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 CACNA1DQ01668 2161 aa12.35□□□□□ -0.43
SDF4-203ENST00000403997 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 IQANK1A0A1B0GTG1 560 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 ARHGAP10A1A4S6 786 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 ENO4A6NNW6 628 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 A8MT66 165 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 PPP6CO00743 305 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 ZNHIT1O43257 154 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 SEMA3DO95025 777 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 KLK1P06870 262 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 RPS17P08708 135 aaKnown RBP12.34□□□□□ -0.43
SDF4-203ENST00000403997 SBK3P0C264 359 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 NR2F6P10588 404 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 ABOP16442 354 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 TAC1P20366 129 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 HSF1Q00613 529 aa12.34□□□□□ -0.43
SDF4-203ENST00000403997 ZNF267Q14586 743 aaPredicted RBP12.34□□□□□ -0.43
SDF4-203ENST00000403997 ZNF750Q32MQ0 723 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms