RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CRATP43155 626 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 HYAL2Q12891 473 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 COL9A2Q14055 689 aaPredicted RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 BRAT1Q6PJG6 821 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 PARS2Q7L3T8 475 aaKnown RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 SERPINA11Q86U17 422 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 OR52E4Q8NGH9 312 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ZNF480Q8WV37 535 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 FCGR1BQ92637 280 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 OR2AG1Q9H205 316 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 CCDC59Q9P031 241 aaKnown RBP13.45□□□□□ -0.26
ATG3-202ENST00000402314 HSPE1-MOB4S4R3N1 261 aa13.45□□□□□ -0.26
ATG3-202ENST00000402314 ZNF106Q9H2Y7 1883 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 EYSQ5T1H1 3165 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 FABP12A6NFH5 140 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 B4DXG7 233 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 SUV39H1O43463 412 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 PSIP1O75475 530 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 GCM2O75603 506 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 PRPH2P23942 346 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 RUNX1T1Q06455 604 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 LIPIQ6XZB0 460 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 WDR53Q7Z5U6 358 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 GRASPQ7Z6J2 395 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 TRAPPC5Q8IUR0 188 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 CELF5Q8N6W0 485 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 WDR48Q8TAF3 677 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 TRIM63Q969Q1 353 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 ACOXLQ9NUZ1 547 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 GPATCH2Q9NW75 528 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 KLHL42Q9P2K6 505 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 NLKQ9UBE8 527 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 RUVBL1Q9Y265 456 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 PCYT1BQ9Y5K3 369 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 A0A1W2PQL4 384 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 CIB4A0PJX0 185 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 WASH3PC4AMC7 463 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 SCAMP2O15127 329 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 CLTBP09497 229 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 LINC00271P0C7V0 271 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 EPCAMP16422 314 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 APEX1P27695 318 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 TIE1P35590 1138 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 SRSF11Q05519 484 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 HNRNPA0Q13151 305 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 SP140Q13342 867 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 LIPJQ5W064 366 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 CCDC149Q6ZUS6 474 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 SYT14Q8NB59 555 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 OR8H1Q8NGG4 311 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 FRMD6Q96NE9 622 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 MKRN2Q9H000 416 aaKnown RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 SLA2Q9H6Q3 261 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 CXXC1Q9P0U4 656 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 CRNNQ9UBG3 495 aaPredicted RBP13.44□□□□□ -0.26
ATG3-202ENST00000402314 COMMD3Q9UBI1 195 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 DENND4CQ5VZ89 1909 aa13.44□□□□□ -0.26
ATG3-202ENST00000402314 TMEM229AB2RXF0 380 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 KPNA5O15131 536 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 NOS1APO75052 506 aaPredicted RBP13.43□□□□□ -0.26
ATG3-202ENST00000402314 CATP04040 527 aaKnown RBP13.43□□□□□ -0.26
ATG3-202ENST00000402314 IDSP22304 550 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 TBPL1P62380 186 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 HBA1P69905 142 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 FAPQ12884 760 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 TATDN3Q17R31 274 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 FAHD1Q6P587 224 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 TSEN54Q7Z6J9 526 aaKnown RBP13.43□□□□□ -0.26
ATG3-202ENST00000402314 OR4A15Q8NGL6 344 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 CFHR5Q9BXR6 569 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 RPS6KA6Q9UK32 745 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 PCDHB11Q9Y5F2 797 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 ARHGEF9O43307 516 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 ATG13O75143 517 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 OR2B3O76000 313 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 C6orf47O95873 294 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 CSF3P09919 207 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 GPC1P35052 558 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 IRS1P35568 1242 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 MAN2A2P49641 1150 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 SCN1BQ07699 218 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 CSTF3Q12996 717 aaKnown RBP13.43□□□□□ -0.26
ATG3-202ENST00000402314 C22orf42Q6IC83 251 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 TECPR1Q7Z6L1 1165 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 ATCAYQ86WG3 371 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 FAM109AQ8N4B1 249 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 TRAM1L1Q8N609 369 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 ZFP41Q8N8Y5 198 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 SPERTQ8NA61 448 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 C11orf24Q96F05 449 aaPredicted RBP13.43□□□□□ -0.26
ATG3-202ENST00000402314 PAWRQ96IZ0 340 aaKnown RBP13.43□□□□□ -0.26
ATG3-202ENST00000402314 C19orf43Q9BQ61 176 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 GABARAPL1Q9H0R8 117 aa13.43□□□□□ -0.26
ATG3-202ENST00000402314 IL36AQ9UHA7 158 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms