RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ZC3H12BQ5HYM0 836 aaKnown RBP24.2■■□□□ 1.46
CPNE1-205ENST00000401607 TMEM105Q8N8V8 129 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 OR10Q1Q8NGQ4 319 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 ZFP28Q8NHY6 868 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 TCTN2Q96GX1 697 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF681Q96N22 645 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 EPHA6Q9UF33 1036 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 SUSD2Q9UGT4 822 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 SLC22A7Q9Y694 548 aa24.2■■□□□ 1.46
CPNE1-205ENST00000401607 NUDT21O43809 227 aaKnown RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 SPDYE7PQ495Y7 208 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 SWT1Q5T5J6 900 aaKnown RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 C6orf120Q7Z4R8 191 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 BTBD9Q96Q07 612 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 PADI4Q9UM07 663 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 TLCD2A6NGC4 264 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 CLOCKO15516 846 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 GALR3O60755 368 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 EPHA8P29322 1005 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 PTGER1P34995 402 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 FEN1P39748 380 aaKnown RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 GABRA4P48169 554 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 CCT3P49368 545 aaKnown RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 PPM1FP49593 454 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 OR1D5P58170 312 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 RPS26P62854 115 aaKnown RBP24.19■■□□□ 1.46
CPNE1-205ENST00000401607 PRTGQ2VWP7 1150 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 CBLL1Q75N03 491 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 KANSL1Q7Z3B3 1105 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 CCDC116Q8IYX3 515 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 SHISA5Q8N114 240 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 NCSTNQ92542 709 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 YY1AP1Q9H869 796 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 NTN4Q9HB63 628 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 LYRM4Q9HD34 91 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 NAALAD2Q9Y3Q0 740 aa24.19■■□□□ 1.46
CPNE1-205ENST00000401607 IGHV1OR21-1A0A087WYE8 117 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 IGHV5-51A0A0C4DH38 117 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 TMEM221A6NGB7 291 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 M0R296 226 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 SOCS2O14508 198 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF682O95780 498 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 ARAFP10398 606 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 ALPPL2P10696 532 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 MYF5P13349 255 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 CSNK2A2P19784 350 aaPredicted RBP24.18■■□□□ 1.46
CPNE1-205ENST00000401607 GPC1P35052 558 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 DSTNP60981 165 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 SCARB2Q14108 478 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 SPIDRQ14159 915 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 INTS11Q5TA45 600 aaKnown RBP24.18■■□□□ 1.46
CPNE1-205ENST00000401607 EIF3MQ7L2H7 374 aaKnown RBP24.18■■□□□ 1.46
CPNE1-205ENST00000401607 HORMAD2Q8N7B1 307 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 NFKBIDQ8NI38 313 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 PIGKQ92643 395 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 VCXQ9H320 206 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 FSCN3Q9NQT6 498 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 RPS6KA6Q9UK32 745 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 OAZ3Q9UMX2 235 aa24.18■■□□□ 1.46
CPNE1-205ENST00000401607 UPK1AO00322 258 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 ACOX3O15254 700 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 SRPX2O60687 465 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-205ENST00000401607 PRSS23O95084 383 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 UQCRBP14927 111 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 GLB1P16278 677 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 AQP1P29972 269 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 PRIM2P49643 509 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 NRF1Q16656 503 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 OR52E8Q6IFG1 317 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 PPP4R4Q6NUP7 873 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 TMEM64Q6YI46 380 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 ZBTB49Q6ZSB9 765 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 OR5T3Q8NGG3 340 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 SERHL2Q9H4I8 314 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 GIMAP4Q9NUV9 329 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 ZSCAN32Q9NX65 697 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 MS4A12Q9NXJ0 267 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 SDK1Q7Z5N4 2213 aa24.17■■□□□ 1.46
CPNE1-205ENST00000401607 DEAF1O75398 565 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-205ENST00000401607 SEMG1P04279 462 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 CDK6Q00534 326 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 NR1D2Q14995 579 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF630Q2M218 657 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-205ENST00000401607 PEAR1Q5VY43 1037 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-205ENST00000401607 CEACAM20Q6UY09 585 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 SPRED1Q7Z699 444 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 ZDHHC12Q96GR4 267 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF285Q96NJ3 590 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 CD180Q99467 661 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 BDH2Q9BUT1 245 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 PSME2Q9UL46 239 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF780BQ9Y6R6 833 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 A0A1B0GTQ1 180 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 C7orf72A4D263 438 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 H0YJX3 145 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 PDLIM1O00151 329 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 MAGEA2P43356 314 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 SIM1P81133 766 aaPredicted RBP24.16■■□□□ 1.46
CPNE1-205ENST00000401607 TP53BP2Q13625 1128 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 TNFAIP8L2Q6P589 184 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms