RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PRM3Q9NNZ6 103 aa15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ATAD3AQ9NVI7 634 aa15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SH3BP4Q9P0V3 963 aa15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 RNF6Q9Y252 685 aa15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SLC17A4Q9Y2C5 497 aa15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PCDHGA6Q9Y5G7 932 aa15.17■□□□□ 0.02
CHRFAM7A-203ENST00000401522 A0A1W2PR77 199 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TMEM229AB2RXF0 380 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TNFRSF11BO00300 401 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 CD38P28907 300 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 RPL3P39023 403 aaKnown RBP15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 DHPSP49366 369 aaPredicted RBP15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 RPS13P62277 151 aaKnown RBP15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NFATC4Q14934 902 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 GCNT6Q5T4J0 391 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 P3H2Q8IVL5 708 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NAGSQ8N159 534 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 FBXO15Q8NCQ5 510 aaPredicted RBP15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 GPR156Q8NFN8 814 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 OR13H1Q8NG92 308 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 MYDGFQ969H8 173 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SLC38A4Q969I6 547 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 MAL2Q969L2 176 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 MIR1-1HGQ9H1L0 117 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 OR2AG1Q9H205 316 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 REEP4Q9H6H4 257 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TMEM98Q9Y2Y6 226 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 LYVE1Q9Y5Y7 322 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 USP34Q70CQ2 3546 aa15.16■□□□□ 0.02
CHRFAM7A-203ENST00000401522 FOXE1O00358 373 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 GCM2O75603 506 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 CD36P16671 472 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 KELP23276 732 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 AQP1P29972 269 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ALDH4A1P30038 563 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TGFBR2P37173 567 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 LSM3P62310 102 aaKnown RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TEKQ02763 1124 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ZNF763Q0D2J5 394 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 HIST2H2ACQ16777 129 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 IFI44LQ53G44 452 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 BTLAQ7Z6A9 289 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PLD3Q8IV08 490 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ZBTB8BQ8NAP8 495 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 OR52N2Q8NGI0 321 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SPPL2AQ8TCT8 520 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 LGALS12Q96DT0 336 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ITPKCQ96DU7 683 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 WDR34Q96EX3 536 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 KLHDC7BQ96G42 594 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ZNF514Q96K75 400 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PRRX2Q99811 253 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ITPAQ9BY32 194 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NDUFAF4Q9P032 175 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 GPR34Q9UPC5 381 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 DOLKQ9UPQ8 538 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PMF1-BGLAPU3KQ54 211 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 A8MVJ9 347 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 BCAT2O15382 392 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TNFRSF21O75509 655 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NTRK1P04629 796 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 CEACAM5P06731 702 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ALOX5P09917 674 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 THEGLP0DJG4 465 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ANXA8P13928 327 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ZNF8P17098 575 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NCS1P62166 190 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TUBA1BP68363 451 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TBCEQ15813 527 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 INAQ16352 499 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 CYP2A13Q16696 494 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TPRG1LQ5T0D9 272 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 ADNP2Q6IQ32 1131 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TUBA1AQ71U36 451 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TSEN54Q7Z6J9 526 aaKnown RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SLC22A18ASQ8N1D0 253 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 UBE2FQ969M7 185 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NEIL2Q969S2 332 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 TAMM41Q96BW9 452 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SCARF2Q96GP6 870 aaPredicted RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 NEURL2Q9BR09 285 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 COPS4Q9BT78 406 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 EFCAB11Q9BUY7 163 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 RMI1Q9H9A7 625 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PSORS1C1Q9UIG5 152 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 OSGIN1Q9UJX0 560 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 PILRBQ9UKJ0 227 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 EXO1Q9UQ84 846 aaKnown RBP15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 POFUT2Q9Y2G5 429 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 WDFY4Q6ZS81 3184 aa15.15■□□□□ 0.02
CHRFAM7A-203ENST00000401522 SPTY2D1-AS1A0A0U1RR47 76 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 EFCAB9A8MZ26 197 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TNFRSF10CO14798 259 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 WNT1P04628 370 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 LCKP06239 509 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 BMP4P12644 408 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ITGA2P17301 1181 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 UGT2B10P36537 528 aa15.14■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CRATP43155 626 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms